Literature DB >> 8017909

Analysis of competition in soil among 2,4-dichlorophenoxyacetic acid-degrading bacteria.

J O Ka1, W E Holben, J M Tiedje.   

Abstract

Competition among indigenous and inoculated 2,4-dichlorophenoxyacetic acid (2,4-D)-degrading bacteria was studied in a native Kansas prairie soil following 2,4-D additions. The soil was inoculated with four different 2,4-D-degrading strains at densities of 10(3) cells per g of soil; the organisms used were Pseudomonas cepacia DBO1(pJP4) and three Michigan soil isolates, strain 745, Sphingomonas paucimobilis 1443, and Pseudomonas pickettii 712. Following 2,4-D additions, total soil DNA was extracted and analyzed on Southern blots by using a tfdA gene probe which detected three of the strains and another probe that detected the fourth strain, S. paucimobilis 1443, which belongs to a different class of 2,4-D degraders. P. cepacia DBO1(pJP4), a constructed strain, outcompeted the other added strains and the indigenous 2,4-D-degrading populations. The S. paucimobilis population was the secondary dominant population, and strain 745 and P. pickettii were not detected. Relative fitness coefficients determined in axenic broth cultures predicted the outcome of competition in soil for some but not all strains. Lag time was shown to be a principal determinant of competitiveness among the strains, but the lag times were significantly reduced in mixed broth cultures, which changed the competitive outcome. Plasmids containing the genes for the 2,4-D pathway were important determinants of competitiveness since plasmid pKA4 in P. cepacia DBO1 resulted in the slower growth characteristic of its original host, P. pickettii, rather than the rapid growth observed when this strain harbors pJP4.

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Year:  1994        PMID: 8017909      PMCID: PMC201448          DOI: 10.1128/aem.60.4.1121-1128.1994

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  8 in total

1.  Kinetic comparison of seven strains of 2,4-dichlorophenoxyacetic acid-degrading bacteria.

Authors:  L E Greer; J A Robinson; D R Shelton
Journal:  Appl Environ Microbiol       Date:  1992-03       Impact factor: 4.792

2.  DNA Probe Method for the Detection of Specific Microorganisms in the Soil Bacterial Community.

Authors:  William E Holben; Janet K Jansson; Barry K Chelm; James M Tiedje
Journal:  Appl Environ Microbiol       Date:  1988-03       Impact factor: 4.792

3.  Properties of six pesticide degradation plasmids isolated from Alcaligenes paradoxus and Alcaligenes eutrophus.

Authors:  R H Don; J M Pemberton
Journal:  J Bacteriol       Date:  1981-02       Impact factor: 3.490

4.  The aerobic pseudomonads: a taxonomic study.

Authors:  R Y Stanier; N J Palleroni; M Doudoroff
Journal:  J Gen Microbiol       Date:  1966-05

5.  Gene probe analysis of soil microbial populations selected by amendment with 2,4-dichlorophenoxyacetic acid.

Authors:  W E Holben; B M Schroeter; V G Calabrese; R H Olsen; J K Kukor; V O Biederbeck; A E Smith; J M Tiedje
Journal:  Appl Environ Microbiol       Date:  1992-12       Impact factor: 4.792

6.  Competition for L-glutamate between specialised and versatile Clostridium species.

Authors:  H J Laanbroek; A J Smit; G K Nulend; H Veldkamp
Journal:  Arch Microbiol       Date:  1979-01-16       Impact factor: 2.552

7.  Use of gene probes to aid in recovery and identification of functionally dominant 2,4-dichlorophenoxyacetic acid-degrading populations in soil.

Authors:  J O Ka; W E Holben; J M Tiedje
Journal:  Appl Environ Microbiol       Date:  1994-04       Impact factor: 4.792

8.  Genetic and phenotypic diversity of 2,4-dichlorophenoxyacetic acid (2,4-D)-degrading bacteria isolated from 2,4-D-treated field soils.

Authors:  J O Ka; W E Holben; J M Tiedje
Journal:  Appl Environ Microbiol       Date:  1994-04       Impact factor: 4.792

  8 in total
  15 in total

1.  Quantification of bias related to the extraction of DNA directly from soils.

Authors:  A Frostegård; S Courtois; V Ramisse; S Clerc; D Bernillon; F Le Gall; P Jeannin; X Nesme; P Simonet
Journal:  Appl Environ Microbiol       Date:  1999-12       Impact factor: 4.792

2.  Novel 2,4-dichlorophenoxyacetic acid degradation genes from oligotrophic Bradyrhizobium sp. strain HW13 isolated from a pristine environment.

Authors:  Wataru Kitagawa; Sachiko Takami; Keisuke Miyauchi; Eiji Masai; Yoichi Kamagata; James M Tiedje; Masao Fukuda
Journal:  J Bacteriol       Date:  2002-01       Impact factor: 3.490

3.  Pristine environments harbor a new group of oligotrophic 2,4-dichlorophenoxyacetic acid-degrading bacteria.

Authors:  Y Kamagata; R R Fulthorpe; K Tamura; H Takami; L J Forney; J M Tiedje
Journal:  Appl Environ Microbiol       Date:  1997-06       Impact factor: 4.792

4.  Characterization of a chromosomally encoded 2,4-dichlorophenoxyacetic acid/alpha-ketoglutarate dioxygenase from Burkholderia sp. strain RASC.

Authors:  Y Suwa; A D Wright; F Fukimori; K A Nummy; R P Hausinger; W E Holben; L J Forney
Journal:  Appl Environ Microbiol       Date:  1996-07       Impact factor: 4.792

5.  Inactivation of gacS does not affect the competitiveness of Pseudomonas chlororaphis in the Arabidopsis thaliana rhizosphere.

Authors:  Heike Schmidt-Eisenlohr; Astrid Gast; Christian Baron
Journal:  Appl Environ Microbiol       Date:  2003-03       Impact factor: 4.792

6.  Characterization of diverse 2,4-dichlorophenoxyacetic acid-degradative plasmids isolated from soil by complementation.

Authors:  E M Top; W E Holben; L J Forney
Journal:  Appl Environ Microbiol       Date:  1995-05       Impact factor: 4.792

7.  Evidence for Acquisition in Nature of a Chromosomal 2,4-Dichlorophenoxyacetic Acid/(alpha)-Ketoglutarate Dioxygenase Gene by Different Burkholderia spp.

Authors:  V G Matheson; L J Forney; Y Suwa; C H Nakatsu; A J Sexstone; W E Holben
Journal:  Appl Environ Microbiol       Date:  1996-07       Impact factor: 4.792

8.  Genetic Diversity through the Looking Glass: Effect of Enrichment Bias.

Authors:  J Dunbar; S White; L Forney
Journal:  Appl Environ Microbiol       Date:  1997-04       Impact factor: 4.792

9.  Degradation of Chlorophenols by Alcaligenes eutrophus JMP134(pJP4) in Bleached Kraft Mill Effluent.

Authors:  J Valenzuela; U Bumann; R Cespedes; L Padilla; B Gonzalez
Journal:  Appl Environ Microbiol       Date:  1997-01       Impact factor: 4.792

10.  Abundance of novel and diverse tfdA-like genes, encoding putative phenoxyalkanoic acid herbicide-degrading dioxygenases, in soil.

Authors:  Adrienne Zaprasis; Ya-Jun Liu; Shuang-Jiang Liu; Harold L Drake; Marcus A Horn
Journal:  Appl Environ Microbiol       Date:  2009-10-30       Impact factor: 4.792

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