Literature DB >> 8007957

CCR4 is a glucose-regulated transcription factor whose leucine-rich repeat binds several proteins important for placing CCR4 in its proper promoter context.

M P Draper1, H Y Liu, A H Nelsbach, S P Mosley, C L Denis.   

Abstract

The yeast CCR4 protein is required for the expression of a number of genes involved in nonfermentative growth, including glucose-repressible ADH2, and is the only known suppressor of mutations in the SPT6 and SPT10 genes, two genes which are believed to be involved in chromatin maintenance. We show here that although CCR4 did not bind DNA under the conditions tested, it was able to activate transcription when fused to a heterologous DNA-binding domain. The transcriptional activation ability of CCR4, in contrast to that of many other activators, was glucose regulated. Two activation domains one of which was glucose responsive and encompassed a glutamine-proline-rich region similar to that found in other eukaryotic transcriptional factors were identified. The two transactivation regions, when separated from the leucine-rich repeat and the C terminus of CCR4, were unable to complement a defective ccr4 allele, suggesting that the leucine-rich repeat and the C terminus make contacts that link the activation regions to the proper gene context. Native immunoprecipitation of CCR4 revealed that CCR4 was complexed with at least four other proteins. The leucine-rich repeat of CCR4 was both necessary and sufficient for interaction with at least two of these factors. We propose that the leucine-rich repeat links CCR4 through its associated factors to its promoter context at ADH2 and other loci where it is required for proper transcriptional regulation.

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Year:  1994        PMID: 8007957      PMCID: PMC358824          DOI: 10.1128/mcb.14.7.4522-4531.1994

Source DB:  PubMed          Journal:  Mol Cell Biol        ISSN: 0270-7306            Impact factor:   4.272


  43 in total

1.  Genetic analysis of the repetitive carboxyl-terminal domain of the largest subunit of mouse RNA polymerase II.

Authors:  M S Bartolomei; N F Halden; C R Cullen; J L Corden
Journal:  Mol Cell Biol       Date:  1988-01       Impact factor: 4.272

2.  The yeast regulatory protein ADR1 binds in a zinc-dependent manner to the upstream activating sequence of ADH2.

Authors:  A Eisen; W E Taylor; H Blumberg; E T Young
Journal:  Mol Cell Biol       Date:  1988-10       Impact factor: 4.272

3.  Changes in histone gene dosage alter transcription in yeast.

Authors:  C D Clark-Adams; D Norris; M A Osley; J S Fassler; F Winston
Journal:  Genes Dev       Date:  1988-02       Impact factor: 11.361

4.  Silver staining of proteins in polyacrylamide gels.

Authors:  W Wray; T Boulikas; V P Wray; R Hancock
Journal:  Anal Biochem       Date:  1981-11-15       Impact factor: 3.365

5.  The SPT6 gene is essential for growth and is required for delta-mediated transcription in Saccharomyces cerevisiae.

Authors:  C D Clark-Adams; F Winston
Journal:  Mol Cell Biol       Date:  1987-02       Impact factor: 4.272

6.  Functional redundancy and structural polymorphism in the large subunit of RNA polymerase II.

Authors:  M Nonet; D Sweetser; R A Young
Journal:  Cell       Date:  1987-09-11       Impact factor: 41.582

7.  Suppressors of SNF2 mutations restore invertase derepression and cause temperature-sensitive lethality in yeast.

Authors:  L Neigeborn; K Rubin; M Carlson
Journal:  Genetics       Date:  1986-04       Impact factor: 4.562

8.  Evidence that SNF2/SWI2 and SNF5 activate transcription in yeast by altering chromatin structure.

Authors:  J N Hirschhorn; S A Brown; C D Clark; F Winston
Journal:  Genes Dev       Date:  1992-12       Impact factor: 11.361

9.  Analysis of Sp1 in vivo reveals multiple transcriptional domains, including a novel glutamine-rich activation motif.

Authors:  A J Courey; R Tjian
Journal:  Cell       Date:  1988-12-02       Impact factor: 41.582

10.  Isolation and characterization of the positive regulatory gene ADR1 from Saccharomyces cerevisiae.

Authors:  C L Denis; E T Young
Journal:  Mol Cell Biol       Date:  1983-03       Impact factor: 4.272

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  47 in total

1.  CCR4, a 3'-5' poly(A) RNA and ssDNA exonuclease, is the catalytic component of the cytoplasmic deadenylase.

Authors:  Junji Chen; Yueh-Chin Chiang; Clyde L Denis
Journal:  EMBO J       Date:  2002-03-15       Impact factor: 11.598

2.  Crystal structure of the human CNOT6L nuclease domain reveals strict poly(A) substrate specificity.

Authors:  Hui Wang; Masahiro Morita; Xiuna Yang; Toru Suzuki; Wen Yang; Jiao Wang; Kentaro Ito; Quan Wang; Cong Zhao; Mark Bartlam; Tadashi Yamamoto; Zihe Rao
Journal:  EMBO J       Date:  2010-07-13       Impact factor: 11.598

Review 3.  The structural basis for deadenylation by the CCR4-NOT complex.

Authors:  Mark Bartlam; Tadashi Yamamoto
Journal:  Protein Cell       Date:  2010-06-04       Impact factor: 14.870

4.  A highly conserved kinase is an essential component for stress tolerance in yeast and plant cells.

Authors:  J H Lee; M Van Montagu; N Verbruggen
Journal:  Proc Natl Acad Sci U S A       Date:  1999-05-11       Impact factor: 11.205

5.  Isolation and characterization of human orthologs of yeast CCR4-NOT complex subunits.

Authors:  T K Albert; M Lemaire; N L van Berkum; R Gentz; M A Collart; H T Timmers
Journal:  Nucleic Acids Res       Date:  2000-02-01       Impact factor: 16.971

6.  DBF2, a cell cycle-regulated protein kinase, is physically and functionally associated with the CCR4 transcriptional regulatory complex.

Authors:  H Y Liu; J H Toyn; Y C Chiang; M P Draper; L H Johnston; C L Denis
Journal:  EMBO J       Date:  1997-09-01       Impact factor: 11.598

7.  An unconventional human Ccr4-Caf1 deadenylase complex in nuclear cajal bodies.

Authors:  Eileen Wagner; Sandra L Clement; Jens Lykke-Andersen
Journal:  Mol Cell Biol       Date:  2006-12-18       Impact factor: 4.272

8.  Structure and RNA-binding properties of the Not1-Not2-Not5 module of the yeast Ccr4-Not complex.

Authors:  Varun Bhaskar; Vladimir Roudko; Jérôme Basquin; Kundan Sharma; Henning Urlaub; Bertrand Séraphin; Elena Conti
Journal:  Nat Struct Mol Biol       Date:  2013-10-13       Impact factor: 15.369

Review 9.  Molecular genetics of the RNA polymerase II general transcriptional machinery.

Authors:  M Hampsey
Journal:  Microbiol Mol Biol Rev       Date:  1998-06       Impact factor: 11.056

10.  Crystal structure and functional properties of the human CCR4-CAF1 deadenylase complex.

Authors:  Ying Chen; Elena Khazina; Elisa Izaurralde; Oliver Weichenrieder
Journal:  Nucleic Acids Res       Date:  2021-06-21       Impact factor: 16.971

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