Literature DB >> 8001781

Molecular evolution of the metallothionein gene Mtn in the melanogaster species group: results from Drosophila ananassae.

W Stephan1, V S Rodriguez, B Zhou, J Parsch.   

Abstract

Three distinctly different alleles of the metallothionein gene Mtn have been identified in natural Drosophila melanogaster populations: Mtn.3, Mtn1, and Dp(Mtn1), where the latter designates a tandem duplication of Mtn1. In Drosophila simulans, only Mtn.3-type alleles have been found. It has been suggested that Mtn.3 is the ancestral allele and demonstrated that a presumed two-step transition from Mtn.3 to Mtn1 to Dp(Mtn1) is accompanied by an approximate 5-fold increase in RNA levels. We analyzed the evolutionary genetics of the Mtn locus of Drosophila ananassae, a distant relative of D. melanogaster and D. simulans within the melanogaster species group. The Mtn gene of D. ananassae is most similar to Mtn.3: (i) it is identical with Mtn.3 at the amino acid level, but differs from Mtn1 in its terminal codon; (ii) its 3' UTR contains a characteristic extra DNA segment of about 50 bp which is present in Mtn.3, but lacking in Mtn1; (iii) duplications of Mtn were not found in a worldwide sample of 110 wild D. ananassae chromosomes. However, the intron of the Mtn gene in D. ananassae is only 69 bp long, whereas the length of the Mtn.3 and Mtn1 introns is 265 bp; and it lacks a polypyrimidine stretch upstream of the 3' splice site in contrast to the much greater pyrimidine-richness found in the Mtn.3 and Mtn1 introns. A short intron (67 bp) was also identified in a D. pseudoobscura Mtn allele, suggesting that the short intron is the ancestral form and that the transition from the short to the long intron occurred within the melanogaster species group.(ABSTRACT TRUNCATED AT 250 WORDS)

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Year:  1994        PMID: 8001781      PMCID: PMC1206125     

Source DB:  PubMed          Journal:  Genetics        ISSN: 0016-6731            Impact factor:   4.562


  27 in total

1.  The phylogenetic relationships of flies in the family Drosophilidae deduced from mtDNA sequences.

Authors:  R DeSalle
Journal:  Mol Phylogenet Evol       Date:  1992-03       Impact factor: 4.286

2.  Splicing signals in Drosophila: intron size, information content, and consensus sequences.

Authors:  S M Mount; C Burks; G Hertz; G D Stormo; O White; C Fields
Journal:  Nucleic Acids Res       Date:  1992-08-25       Impact factor: 16.971

3.  Molecular genetic variation in the centromeric region of the X chromosome in three Drosophila ananassae populations. I. Contrasts between the vermilion and forked loci.

Authors:  W Stephan; C H Langley
Journal:  Genetics       Date:  1989-01       Impact factor: 4.562

4.  Molecular genetic variation in the centromeric region of the X chromosome in three Drosophila ananassae populations. II. The Om(1D) locus.

Authors:  W Stephan
Journal:  Mol Biol Evol       Date:  1989-11       Impact factor: 16.240

5.  Lack of polymorphism on the Drosophila fourth chromosome resulting from selection.

Authors:  A J Berry; J W Ajioka; M Kreitman
Journal:  Genetics       Date:  1991-12       Impact factor: 4.562

6.  Single-strand conformation polymorphism analysis coupled with stratified DNA sequencing reveals reduced sequence variation in the su(s) and su(wa) regions of the Drosophila melanogaster X chromosome.

Authors:  M Aguadé; W Meyers; A D Long; C H Langley
Journal:  Proc Natl Acad Sci U S A       Date:  1994-05-24       Impact factor: 11.205

7.  Molecular evolution in Drosophila and the higher Diptera II. A time scale for fly evolution.

Authors:  S M Beverley; A C Wilson
Journal:  J Mol Evol       Date:  1984       Impact factor: 2.395

8.  Molecular and cytogenetic characterization of a metallothionein gene of Drosophila.

Authors:  G Maroni; E Otto; D Lastowski-Perry
Journal:  Genetics       Date:  1986-03       Impact factor: 4.562

9.  Signals for the selection of a splice site in pre-mRNA. Computer analysis of splice junction sequences and like sequences.

Authors:  Y Ohshima; Y Gotoh
Journal:  J Mol Biol       Date:  1987-05-20       Impact factor: 5.469

10.  Cloning of DNA sequences from the white locus of D. melanogaster by a novel and general method.

Authors:  P M Bingham; R Levis; G M Rubin
Journal:  Cell       Date:  1981-09       Impact factor: 41.582

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  16 in total

1.  Insertion/deletion and nucleotide polymorphism data reveal constraints in Drosophila melanogaster introns and intergenic regions.

Authors:  Lino Ometto; Wolfgang Stephan; David De Lorenzo
Journal:  Genetics       Date:  2005-01-16       Impact factor: 4.562

2.  Small metallothionein MT-10 genes in coastal and hydrothermal mussels.

Authors:  V Leignel; Y Hardivillier; M Laulier
Journal:  Mar Biotechnol (NY)       Date:  2005-05-05       Impact factor: 3.619

3.  Genomic organization and characterization of the white locus of the Mediterranean fruitfly, Ceratitis capitata.

Authors:  L M Gomulski; R J Pitts; S Costa; G Saccone; C Torti; L C Polito; G Gasperi; A R Malacrida; F C Kafatos; L J Zwiebel
Journal:  Genetics       Date:  2001-03       Impact factor: 4.562

4.  Multi-locus selection and the structure of variation at the white gene of Drosophila melanogaster.

Authors:  D A Kirby; W Stephan
Journal:  Genetics       Date:  1996-10       Impact factor: 4.562

5.  Molecular Identification, Characterization, and Expression Analysis of a Metallothionein Gene from Septifer virgatus.

Authors:  Akihiro Sakatoku; Masahito Ishikawa; Kanna Yamazaki; Tomoya Nakamachi; Hiroyuki Kamachi; Daisuke Tanaka; Shogo Nakamura
Journal:  Mar Biotechnol (NY)       Date:  2020-05-21       Impact factor: 3.619

6.  The correlation between intron length and recombination in drosophila. Dynamic equilibrium between mutational and selective forces.

Authors:  J M Comeron; M Kreitman
Journal:  Genetics       Date:  2000-11       Impact factor: 4.562

7.  On the utility of short intron sequences as a reference for the detection of positive and negative selection in Drosophila.

Authors:  John Parsch; Sergey Novozhilov; Sarah S Saminadin-Peter; Karen M Wong; Peter Andolfatto
Journal:  Mol Biol Evol       Date:  2010-02-11       Impact factor: 16.240

8.  Phylogenetic Analysis of Molluscan Metallothioneins: Evolutionary Insight from Crassostrea virginica.

Authors:  Matthew J Jenny; Samantha L Payton; David A Baltzegar; Jeffrey D Lozier
Journal:  J Mol Evol       Date:  2016-09-27       Impact factor: 2.395

9.  Selective and mutational patterns associated with gene expression in humans: influences on synonymous composition and intron presence.

Authors:  Josep M Comeron
Journal:  Genetics       Date:  2004-07       Impact factor: 4.562

10.  Selective constraints on intron evolution in Drosophila.

Authors:  John Parsch
Journal:  Genetics       Date:  2003-12       Impact factor: 4.562

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