Literature DB >> 8000136

A single linkage group comprising 11 polymorphic DNA markers on rat chromosome 3.

H Zha1, E F Remmers, Y Du, E A Goldmuntz, P Mathern, H Zhang, J M Cash, L J Crofford, R L Wilder.   

Abstract

Eleven polymorphic DNA markers were mapped to rat Chromosome (Chr) 3 by linkage analysis of F2 progeny of F344/N and LEW/N rat strains. The markers, including seven genes and four anonymous loci, formed a single linkage group covering approximately 112 cM with the following order: Ptgs1 (prostaglandin G/H synthase I)-D3Arb178-Scn2a (sodium channel, type II, alpha-polypeptide)-D3Arb1-Cat (catalase)-Bdnf (brain-derived neurotropic factor)-D3Arb219-D3Arb2-Sus2 (seminal vesicle secretion II protein)-Sdc4 (ryudocan/syndecan4)-Stn1 (statin-like protein). Eight of these markers were analyzed for polymorphisms in 14 additional inbred rat strains. Three to five alleles were detected for each marker, suggesting that they are highly polymorphic and useful for genetic mapping studies with inbred rat strains. Chromosomal syntenic conservation among rats, mice and humans is also discussed.

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Year:  1994        PMID： 8000136     DOI： 10.1007/BF00354926

Source DB:  PubMed          Journal:  Mamm Genome        ISSN： 0938-8990            Impact factor:   2.957


  10 in total

1.  A computer program for selection of oligonucleotide primers for polymerase chain reactions.

Authors:  T Lowe; J Sharefkin; S Q Yang; C W Dieffenbach
Journal:  Nucleic Acids Res       Date:  1990-04-11       Impact factor: 16.971

2.  Computerized estimation of size of nucleic acid fragments using the four-parameter logistic model.

Authors:  K E Oerter; P J Munson; W O McBride; D Rodbard
Journal:  Anal Biochem       Date:  1990-09       Impact factor: 3.365

3.  DNA polymorphisms amplified by arbitrary primers are useful as genetic markers.

Authors:  J G Williams; A R Kubelik; K J Livak; J A Rafalski; S V Tingey
Journal:  Nucleic Acids Res       Date:  1990-11-25       Impact factor: 16.971

4.  Linkage map of 10 polymorphic markers on rat chromosome 2.

Authors:  H Zha; R L Wilder; E A Goldmuntz; J M Cash; L J Crofford; P Mathern; E F Remmers
Journal:  Cytogenet Cell Genet       Date:  1993

5.  A comprehensive set of sequence analysis programs for the VAX.

Authors:  J Devereux; P Haeberli; O Smithies
Journal:  Nucleic Acids Res       Date:  1984-01-11       Impact factor: 16.971

6.  Cyclooxygenase is an immediate-early gene induced by interleukin-1 in human endothelial cells.

Authors:  J A Maier; T Hla; T Maciag
Journal:  J Biol Chem       Date:  1990-07-05       Impact factor: 5.157

7.  Rat gene mapping using PCR-analyzed microsatellites.

Authors:  T Serikawa; T Kuramoto; P Hilbert; M Mori; J Yamada; C J Dubay; K Lindpainter; D Ganten; J L Guénet; G M Lathrop
Journal:  Genetics       Date:  1992-07       Impact factor: 4.562

8.  Genetic map of nine polymorphic loci comprising a single linkage group on rat chromosome 10: evidence for linkage conservation with human chromosome 17 and mouse chromosome 11.

Authors:  E F Remmers; E A Goldmuntz; J M Cash; L J Crofford; B Misiewicz-Poltorak; H Zha; R L Wilder
Journal:  Genomics       Date:  1992-11       Impact factor: 5.736

9.  Chromosomal mapping of two genetic loci associated with blood-pressure regulation in hereditary hypertensive rats.

Authors:  P Hilbert; K Lindpaintner; J S Beckmann; T Serikawa; F Soubrier; C Dubay; P Cartwright; B De Gouyon; C Julier; S Takahasi
Journal:  Nature       Date:  1991-10-10       Impact factor: 49.962

10.  MAPMAKER: an interactive computer package for constructing primary genetic linkage maps of experimental and natural populations.

Authors:  E S Lander; P Green; J Abrahamson; A Barlow; M J Daly; S E Lincoln; L A Newberg; L Newburg
Journal:  Genomics       Date:  1987-10       Impact factor: 5.736
  10 in total
  1 in total

1.  Localization of the rat stimulatory G-protein alpha subunit (GNPAS) gene to rat chromosome 3 by linkage analysis.

Authors:  N Kato; M Bihoreau; G M Lathrop; J P Rapp
Journal:  Mamm Genome       Date:  1996-08       Impact factor: 2.957
  1 in total

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