Literature DB >> 7991606

Terminal protein-primed DNA amplification.

L Blanco1, J M Lázaro, M de Vega, A Bonnin, M Salas.   

Abstract

By using appropriate amounts of four bacteriophage phi 29 DNA replication proteins--terminal protein, DNA polymerase, protein p6 (double-stranded DNA-binding protein), and protein p5 (single-stranded DNA-binding protein)--it has been possible to amplify limited amounts of the 19,285-bp-long phi 29 DNA molecule by three orders of magnitude after 1 hr of incubation at 30 degrees C. Moreover, the quality of the amplified material was demonstrated by transfection experiments, in which infectivity of the synthetic (amplified) phi 29 DNA, measured as the ability to produce phage particles, was identical to that of the natural phi 29 DNA obtained from virions. The results presented in this paper establish some of the requisites for the development of isothermal DNA amplification strategies based on the bacteriophage phi 29 DNA replication machinery that are suitable for the amplification of very large (> 70 kb) segments of DNA.

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Year:  1994        PMID: 7991606      PMCID: PMC45404          DOI: 10.1073/pnas.91.25.12198

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  32 in total

1.  Initiation of phi 29 DNA replication occurs at the second 3' nucleotide of the linear template: a sliding-back mechanism for protein-primed DNA replication.

Authors:  J Méndez; L Blanco; J A Esteban; A Bernad; M Salas
Journal:  Proc Natl Acad Sci U S A       Date:  1992-10-15       Impact factor: 11.205

Review 2.  Molecular mechanics of nucleic acid sequence amplification.

Authors:  U Landegren
Journal:  Trends Genet       Date:  1993-06       Impact factor: 11.639

3.  Temperature-sensitive mutants affected in DNA synthesis in phage phi29 of Bacillus subtilis.

Authors:  A Talavera; M Salas; E Viñuela
Journal:  Eur J Biochem       Date:  1972-12-04

4.  Effective amplification of long targets from cloned inserts and human genomic DNA.

Authors:  S Cheng; C Fockler; W M Barnes; R Higuchi
Journal:  Proc Natl Acad Sci U S A       Date:  1994-06-07       Impact factor: 11.205

5.  Fidelity of phi 29 DNA polymerase. Comparison between protein-primed initiation and DNA polymerization.

Authors:  J A Esteban; M Salas; L Blanco
Journal:  J Biol Chem       Date:  1993-02-05       Impact factor: 5.157

6.  Sequence analysis of the left end of the Bacillus subtilis bacteriophage SPP1 genome.

Authors:  S Chai; U Szepan; G Lüder; T A Trautner; J C Alonso
Journal:  Gene       Date:  1993-07-15       Impact factor: 3.688

7.  PCR amplification of up to 35-kb DNA with high fidelity and high yield from lambda bacteriophage templates.

Authors:  W M Barnes
Journal:  Proc Natl Acad Sci U S A       Date:  1994-03-15       Impact factor: 11.205

8.  Suppressor-sensitive mutants and genetic map of Bacillus subtilis bacteriophage phi 29.

Authors:  F Moreno
Journal:  Virology       Date:  1974-11       Impact factor: 3.616

9.  Genetic and transfection studies with B, subtilis phage SP 50. I. Phage mutants with restricted growth on B. subtilis strain 168.

Authors:  E Rottländer; T A Trautner
Journal:  Mol Gen Genet       Date:  1970

10.  DNA-independent deoxynucleotidylation of the phi 29 terminal protein by the phi 29 DNA polymerase.

Authors:  L Blanco; A Bernad; J A Esteban; M Salas
Journal:  J Biol Chem       Date:  1992-01-15       Impact factor: 5.157

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  27 in total

1.  Phi29 family of phages.

Authors:  W J Meijer; J A Horcajadas; M Salas
Journal:  Microbiol Mol Biol Rev       Date:  2001-06       Impact factor: 11.056

2.  Terminal protein-primed amplification of heterologous DNA with a minimal replication system based on phage Phi29.

Authors:  Mario Mencía; Pablo Gella; Ana Camacho; Miguel de Vega; Margarita Salas
Journal:  Proc Natl Acad Sci U S A       Date:  2011-11-07       Impact factor: 11.205

3.  A passion for research.

Authors:  Margarita Salas
Journal:  Cell Mol Life Sci       Date:  2009-10-22       Impact factor: 9.261

4.  In vitro evolution of terminal protein-containing genomes.

Authors:  J A Esteban; L Blanco; L Villar; M Salas
Journal:  Proc Natl Acad Sci U S A       Date:  1997-04-01       Impact factor: 11.205

5.  My scientific life.

Authors:  Margarita Salas
Journal:  Bacteriophage       Date:  2016-12-15

6.  A novel replicative enzyme encoded by the linear Arthrobacter plasmid pAL1.

Authors:  Stephan Kolkenbrock; Bianca Naumann; Michael Hippler; Susanne Fetzner
Journal:  J Bacteriol       Date:  2010-07-30       Impact factor: 3.490

7.  My life with bacteriophage phi29.

Authors:  Margarita Salas
Journal:  J Biol Chem       Date:  2012-11-02       Impact factor: 5.157

8.  Phi29 DNA polymerase residues Tyr59, His61 and Phe69 of the highly conserved ExoII motif are essential for interaction with the terminal protein.

Authors:  Ralf Eisenbrandt; José M Lázaro; Margarita Salas; Miguel de Vega
Journal:  Nucleic Acids Res       Date:  2002-03-15       Impact factor: 16.971

9.  Counting of six pRNAs of phi29 DNA-packaging motor with customized single-molecule dual-view system.

Authors:  Dan Shu; Hui Zhang; Jiashun Jin; Peixuan Guo
Journal:  EMBO J       Date:  2007-01-24       Impact factor: 11.598

10.  Novel Podoviridae family bacteriophage infecting Weissella cibaria isolated from Kimchi.

Authors:  Hans Petter Kleppen; Helge Holo; Sang-Rok Jeon; Ingolf F Nes; Sung-Sik Yoon
Journal:  Appl Environ Microbiol       Date:  2012-08-10       Impact factor: 4.792

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