Literature DB >> 7987417

Toward cataloguing all rice genes: large-scale sequencing of randomly chosen rice cDNAs from a callus cDNA library.

T Sasaki1, J Song, Y Koga-Ban, E Matsui, F Fang, H Higo, H Nagasaki, M Hori, M Miya, E Murayama-Kayano.   

Abstract

A large-scale sequence analysis of rice cDNA was performed for a library from rice callus cultured in a medium containing 1 p.p.m. of 2,4-dichlorophenoxyacetic acid. Random sequencing of 2778 cDNA clones generated 2259 non-redundant expressed sequence tags (ESTs). The strategy of sequencing cDNAs can yield quickly a large number of novel genes. After translation, 690 sequences showed a significant amino acid sequence similarity to sequences already known from PIR. The source of known proteins ranged from bacteria to human. In this report, the non-redundant set of 280 identified ESTs is analyzed in detail.

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Year:  1994        PMID: 7987417     DOI: 10.1046/j.1365-313x.1994.6040615.x

Source DB:  PubMed          Journal:  Plant J        ISSN: 0960-7412            Impact factor:   6.417


  32 in total

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Review 2.  Role of DREB transcription factors in abiotic and biotic stress tolerance in plants.

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4.  Retrotransposons of rice involved in mutations induced by tissue culture.

Authors:  H Hirochika; K Sugimoto; Y Otsuki; H Tsugawa; M Kanda
Journal:  Proc Natl Acad Sci U S A       Date:  1996-07-23       Impact factor: 11.205

5.  Identification of novel homologues of three low molecular weight subunits of the mitochondrial bc1 complex.

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Journal:  Mol Biol Rep       Date:  1996       Impact factor: 2.316

Review 6.  Genetic and molecular dissection of quantitative traits in rice.

Authors:  M Yano; T Sasaki
Journal:  Plant Mol Biol       Date:  1997-09       Impact factor: 4.076

Review 7.  Retrotransposons of rice: their regulation and use for genome analysis.

Authors:  H Hirochika
Journal:  Plant Mol Biol       Date:  1997-09       Impact factor: 4.076

8.  Phosphate availability affects the thylakoid lipid composition and the expression of SQD1, a gene required for sulfolipid biosynthesis in Arabidopsis thaliana.

Authors:  B Essigmann; S Güler; R A Narang; D Linke; C Benning
Journal:  Proc Natl Acad Sci U S A       Date:  1998-02-17       Impact factor: 11.205

9.  Down-regulation of RFL, the FLO/LFY homolog of rice, accompanied with panicle branch initiation.

Authors:  J Kyozuka; S Konishi; K Nemoto; T Izawa; K Shimamoto
Journal:  Proc Natl Acad Sci U S A       Date:  1998-03-03       Impact factor: 11.205

10.  Sequencing of cDNA clones from the genetic map of tomato (Lycopersicon esculentum).

Authors:  M W Ganal; R Czihal; U Hannappel; D U Kloos; A Polley; H Q Ling
Journal:  Genome Res       Date:  1998-08       Impact factor: 9.043

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