Literature DB >> 7987220

Stability of yeast iso-1-ferricytochrome c as a function of pH and temperature.

D S Cohen1, G J Pielak.   

Abstract

Absorbance-detected thermal denaturation studies of the C102T variant of Saccharomyces cerevisiae iso-1-ferricytochrome c were performed between pH 3 and 5. Thermal denaturation in this pH range is reversible, shows no concentration dependence, and is consistent with a 2-state model. Values for free energy (delta GD), enthalpy (delta HD), and entropy (delta SD) of denaturation were determined as functions of pH and temperature. The value of delta GD at 300 K, pH 4.6, is 5.1 +/- 0.3 kcal mol-1. The change in molar heat capacity upon denaturation (delta Cp), determined by the temperature dependence of delta HD as a function of pH (1.37 +/- 0.06 kcal mol-1 K-1), agrees with the value determined by differential scanning calorimetry. pH-dependent changes in the Soret region indicate that a group or groups in the heme environment of the denatured protein, probably 1 or both heme propionates, ionize with a pK near 4. The C102T variant exhibits both enthalpy and entropy convergence with a delta HD of 1.30 kcal mol-1 residue-1 at 373.6 K and a delta SD of 4.24 cal mol-1 K-1 residue-1 at 385.2 K. These values agree with those for other single-domain, globular proteins.

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Year:  1994        PMID: 7987220      PMCID: PMC2142915          DOI: 10.1002/pro.5560030811

Source DB:  PubMed          Journal:  Protein Sci        ISSN: 0961-8368            Impact factor:   6.725


  32 in total

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Journal:  Biophys Chem       Date:  1976-01       Impact factor: 2.352

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Journal:  Cell       Date:  1979-04       Impact factor: 41.582

3.  Nuclear magnetic resonance titration curves of histidine ring protons. V. Comparative study of cytochrome c from three species and the assignment of individual proton resonances.

Authors:  J S Cohen; M B Hayes
Journal:  J Biol Chem       Date:  1974-09-10       Impact factor: 5.157

4.  Principles that govern the folding of protein chains.

Authors:  C B Anfinsen
Journal:  Science       Date:  1973-07-20       Impact factor: 47.728

5.  Stability of phage T4 lysozymes. I. Native properties and thermal stability of wild type and two mutant lysozymes.

Authors:  M L Elwell; J A Schellman
Journal:  Biochim Biophys Acta       Date:  1977-10-26

6.  Validity of the "two-state" hypothesis for conformational transitions of proteins.

Authors:  R Lumry; R Biltonen
Journal:  Biopolymers       Date:  1966-09       Impact factor: 2.505

7.  Probing weakly polar interactions in cytochrome c.

Authors:  D S Auld; G B Young; A J Saunders; D F Doyle; S F Betz; G J Pielak
Journal:  Protein Sci       Date:  1993-12       Impact factor: 6.725

8.  The significance of denaturant titrations of protein stability: a comparison of rat and baker's yeast cytochrome c and their site-directed asparagine-52-to-isoleucine mutants.

Authors:  T I Koshy; T L Luntz; B Plotkin; A Schejter; E Margoliash
Journal:  Biochem J       Date:  1994-04-15       Impact factor: 3.857

9.  Temperature dependence of the hydrophobic interaction in protein folding.

Authors:  R L Baldwin
Journal:  Proc Natl Acad Sci U S A       Date:  1986-11       Impact factor: 11.205

10.  Mutagenesis at a specific position in a DNA sequence.

Authors:  C A Hutchison; S Phillips; M H Edgell; S Gillam; P Jahnke; M Smith
Journal:  J Biol Chem       Date:  1978-09-25       Impact factor: 5.157

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  23 in total

1.  A polar, solvent-exposed residue can be essential for native protein structure.

Authors:  R B Hill; W F DeGrado
Journal:  Structure       Date:  2000-05-15       Impact factor: 5.006

2.  Thermal stability of hydrophobic heme pocket variants of oxidized cytochrome c.

Authors:  J R Liggins; T P Lo; G D Brayer; B T Nall
Journal:  Protein Sci       Date:  1999-12       Impact factor: 6.725

3.  Structural analysis of a periplasmic binding protein in the tripartite ATP-independent transporter family reveals a tetrameric assembly that may have a role in ligand transport.

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4.  Baseline length and automated fitting of denaturation data.

Authors:  D L Allen; G J Pielak
Journal:  Protein Sci       Date:  1998-05       Impact factor: 6.725

5.  Thermal denaturation of iso-1-cytochrome c variants: comparison with solvent denaturation.

Authors:  L M Herrmann; B E Bowler
Journal:  Protein Sci       Date:  1997-03       Impact factor: 6.725

6.  Mutagenesis of histidine 26 demonstrates the importance of loop-loop and loop-protein interactions for the function of iso-1-cytochrome c.

Authors:  J S Fetrow; U Dreher; D J Wiland; D L Schaak; T L Boose
Journal:  Protein Sci       Date:  1998-04       Impact factor: 6.725

7.  Near-exact enthalpy-entropy compensation governs the thermal unfolding of protonation states of oxidized cytochrome c.

Authors:  Jonathan B Soffer; Reinhard Schweitzer-Stenner
Journal:  J Biol Inorg Chem       Date:  2014-07-17       Impact factor: 3.358

8.  Duplication of genes in an ATP-binding cassette transport system increases dynamic range while maintaining ligand specificity.

Authors:  Sudipa Ghimire-Rijal; Xun Lu; Dean A Myles; Matthew J Cuneo
Journal:  J Biol Chem       Date:  2014-09-10       Impact factor: 5.157

9.  Conformational change and human cytochrome c function: mutation of residue 41 modulates caspase activation and destabilizes Met-80 coordination.

Authors:  Tracy M Josephs; Matthew D Liptak; Gillian Hughes; Alexandra Lo; Rebecca M Smith; Sigurd M Wilbanks; Kara L Bren; Elizabeth C Ledgerwood
Journal:  J Biol Inorg Chem       Date:  2013-01-19       Impact factor: 3.358

10.  Ligand-induced conformational changes in a thermophilic ribose-binding protein.

Authors:  Matthew J Cuneo; Lorena S Beese; Homme W Hellinga
Journal:  BMC Struct Biol       Date:  2008-11-19
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