Literature DB >> 7979388

The novel ion pump rhodopsins from Haloarcula form a family independent from both the bacteriorhodopsin and archaerhodopsin families/tribes.

M Tateno1, K Ihara, Y Mukohata.   

Abstract

Extreme halophiles newly collected from Argentine salt flats were characterized, in one of which, Haloarcula (sp. arg-1), light-driven retinal protein ion pumps were found. The proton pump, cruxrhodopsin-1, shows amino acid sequence homologies of 52% to bacteriorhodopsin and 48% to archaerhodopsin-1. The anion pump, cruxhalorhodopsin-1, identified partially as a 394bp polymerase chain reaction product, shows homologies of 70% to halorhodopsin, and 72% to pharaonis halorhodopsin. The ion pumps (and possibly sensors still to be found) in Haloarcula sp. arg-1, which constitute the cruxrhodopsin-1 family, are distinct from the bacteriorhodopsin and the archaerhodopsin families/tribes.

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Year:  1994        PMID: 7979388     DOI: 10.1006/abbi.1994.1480

Source DB:  PubMed          Journal:  Arch Biochem Biophys        ISSN: 0003-9861            Impact factor:   4.013


  5 in total

1.  Diversity, Mechanism, and Optogenetic Application of Light-Driven Ion Pump Rhodopsins.

Authors:  Keiichi Inoue
Journal:  Adv Exp Med Biol       Date:  2021       Impact factor: 2.622

2.  Genetic cloning and functional expression in Escherichia coli of an archaerhodopsin gene from Halorubrum xinjiangense.

Authors:  Jie Feng; Hong-Can Liu; Jin-Fang Chu; Pei-Jin Zhou; Ji-An Tang; Shuang-Jiang Liu
Journal:  Extremophiles       Date:  2005-08-02       Impact factor: 2.395

3.  The microbial opsin family of optogenetic tools.

Authors:  Feng Zhang; Johannes Vierock; Ofer Yizhar; Lief E Fenno; Satoshi Tsunoda; Arash Kianianmomeni; Matthias Prigge; Andre Berndt; John Cushman; Jürgen Polle; Jon Magnuson; Peter Hegemann; Karl Deisseroth
Journal:  Cell       Date:  2011-12-23       Impact factor: 41.582

4.  Crystal structure of Cruxrhodopsin-3 from Haloarcula vallismortis.

Authors:  Siu Kit Chan; Tomomi Kitajima-Ihara; Ryudoh Fujii; Toshiaki Gotoh; Midori Murakami; Kunio Ihara; Tsutomu Kouyama
Journal:  PLoS One       Date:  2014-09-30       Impact factor: 3.240

5.  High-performance genetically targetable optical neural silencing by light-driven proton pumps.

Authors:  Brian Y Chow; Xue Han; Allison S Dobry; Xiaofeng Qian; Amy S Chuong; Mingjie Li; Michael A Henninger; Gabriel M Belfort; Yingxi Lin; Patrick E Monahan; Edward S Boyden
Journal:  Nature       Date:  2010-01-07       Impact factor: 49.962

  5 in total

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