Literature DB >> 7948919

The reduced stability of a plant alcohol dehydrogenase is due to the substitution of serine for a highly conserved phenylalanine residue.

D F Garvin1, N F Weeden, J J Doyle.   

Abstract

The zinc-binding long-chain alcohol dehydrogenases from plants and animals exhibit a considerable level of amino acid sequence conservation. While the functional importance of many of the conserved residues is known, the role of others has not yet been determined. We have identified a naturally occurring Adh-1 allele in the legume Phaseolus acutifolius with several unusual characteristics. Individuals homozygous for this allele, Adh-1 CN, possess a single isozyme starch gel electrophoretic pattern suggestive of a null allele, and exhibit ADH enzyme activity levels ca. 60% lower than the standard wild-type Adh-1F line. Interestingly, analysis of Adh-1CN homozygotes on an alternative gel system indicates that Adh-1CN does encode a polypeptide capable of forming functional homo- and heterodimers. However, the levels of ADH activity displayed by these isozymes are far lower than those observed for the corresponding wild type ADH-1F isozymes. Dialysis experiments indicate that isozymes containing the ADH-1CN polypeptide are inactivated by slightly acidic conditions, which may explain the apparent null phenotype on starch gels. Elevated temperatures cause a similar loss of enzyme activity. The deduced amino acid sequences of ADH-1CN and ADH-1F were obtained from their corresponding cDNA clones, and the only significant difference detected between the two is a single amino acid replacement substitution. Residue 144 is occupied by phenylalanine in the ADH-1F polypeptide, whereas serine occupies this position in the ADH-1CN polypeptide. The proximity of residue 144 to the catalytic zinc in the substrate-binding pocket, coupled with the fact that it is integral to a defined hydrophobic core of the ADH polypeptide, may explain the observed disruptive effect that the serine substitution has on both the activity and stability of the ADH-1CN polypeptide. It also provides an explanation for the maintenance of phenylalanine or the structurally similar tyrosine at this residue in Zn-binding long-chain ADHs.

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Year:  1994        PMID: 7948919     DOI: 10.1007/bf00013750

Source DB:  PubMed          Journal:  Plant Mol Biol        ISSN: 0167-4412            Impact factor:   4.076


  37 in total

1.  Progressive sequence alignment and molecular evolution of the Zn-containing alcohol dehydrogenase family.

Authors:  H W Sun; B V Plapp
Journal:  J Mol Evol       Date:  1992-06       Impact factor: 2.395

2.  Alcohol Dehydrogenase Polymorphism in Maize-simple and Compound Loci.

Authors:  D Schwartz; T Endo
Journal:  Genetics       Date:  1966-04       Impact factor: 4.562

3.  "A technique for radiolabeling DNA restriction endonuclease fragments to high specific activity". Addendum.

Authors:  A P Feinberg; B Vogelstein
Journal:  Anal Biochem       Date:  1984-02       Impact factor: 3.365

4.  Structure of a triclinic ternary complex of horse liver alcohol dehydrogenase at 2.9 A resolution.

Authors:  H Eklund; J P Samma; L Wallén; C I Brändén; A Akeson; T A Jones
Journal:  J Mol Biol       Date:  1981-03-15       Impact factor: 5.469

5.  Sequence analysis of two null-mutant alleles of the single Arabidopsis Adh locus.

Authors:  R Dolferus; D Van den Bossche; M Jacobs
Journal:  Mol Gen Genet       Date:  1990-11

6.  VARIATION IN ALCOHOL DEHYDROGENASE ACTIVITY AND FLOOD TOLERANCE IN WHITE CLOVER, TRIFOLIUM REPENS.

Authors:  John W Y Chan; Ronald S Burton
Journal:  Evolution       Date:  1992-06       Impact factor: 3.694

7.  Molecular cloning and DNA sequence of the Arabidopsis thaliana alcohol dehydrogenase gene.

Authors:  C Chang; E M Meyerowitz
Journal:  Proc Natl Acad Sci U S A       Date:  1986-03       Impact factor: 11.205

8.  The CTAB-DNA precipitation method: a common mini-scale preparation of template DNA from phagemids, phages or plasmids suitable for sequencing.

Authors:  G Del Sal; G Manfioletti; C Schneider
Journal:  Biotechniques       Date:  1989-05       Impact factor: 1.993

9.  Regulation of expression of Adh genes in maize.

Authors:  D Schwartz
Journal:  Proc Natl Acad Sci U S A       Date:  1976-02       Impact factor: 11.205

10.  Correlation of exons with structural domains in alcohol dehydrogenase.

Authors:  C I Brändén; H Eklund; C Cambillau; A J Pryor
Journal:  EMBO J       Date:  1984-06       Impact factor: 11.598

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  3 in total

1.  Maize glutathione-dependent formaldehyde dehydrogenase cDNA: a novel plant gene of detoxification.

Authors:  J Fliegmann; H Sandermann
Journal:  Plant Mol Biol       Date:  1997-08       Impact factor: 4.076

2.  Characterization of Hypoxically Inducible Lactate Dehydrogenase in Maize.

Authors:  M. E. Christopher; A. G. Good
Journal:  Plant Physiol       Date:  1996-11       Impact factor: 8.340

3.  Molecular phylogeny and evolution of alcohol dehydrogenase (Adh) genes in legumes.

Authors:  Tatsuya Fukuda; Jun Yokoyama; Toru Nakamura; In-Ja Song; Takuro Ito; Toshinori Ochiai; Akira Kanno; Toshiaki Kameya; Masayuki Maki
Journal:  BMC Plant Biol       Date:  2005-04-18       Impact factor: 4.215

  3 in total

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