Literature DB >> 7938199

Molecular dynamics simulation of a hydrated phospholipid bilayer.

J W Essex1, M M Hann, W G Richards.   

Abstract

A hydrated bilayer of the phospholipid 1,2-dimyristoyl-sn-glycero-3-phosphorylcholine (DMPC) has been studied in the course of a molecular dynamics simulation. Comparison of the simulation results with experiment indicates that generally the two agree well. Data are presented concerning all the major system regions, including the hydrocarbon chains, the glycerol region, the lipid headgroups and the hydrating water molecules. The simulations suggest that this model can be extended to the study of more complex systems of greater biochemical interest, such as membrane bound proteins.

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Year:  1994        PMID: 7938199     DOI: 10.1098/rstb.1994.0064

Source DB:  PubMed          Journal:  Philos Trans R Soc Lond B Biol Sci        ISSN: 0962-8436            Impact factor:   6.237


  13 in total

1.  The role of fatty acid unsaturation in minimizing biophysical changes on the structure and local effects of bilayer membranes.

Authors:  Sukit Leekumjorn; Hyun Ju Cho; Yifei Wu; Neil T Wright; Amadeu K Sum; Christina Chan
Journal:  Biochim Biophys Acta       Date:  2009-04-14

2.  Molecular dynamics simulations of a fluid bilayer of dipalmitoylphosphatidylcholine at full hydration, constant pressure, and constant temperature.

Authors:  O Berger; O Edholm; F Jähnig
Journal:  Biophys J       Date:  1997-05       Impact factor: 4.033

3.  Multiscale Simulations of Biological Membranes: The Challenge To Understand Biological Phenomena in a Living Substance.

Authors:  Giray Enkavi; Matti Javanainen; Waldemar Kulig; Tomasz Róg; Ilpo Vattulainen
Journal:  Chem Rev       Date:  2019-03-12       Impact factor: 60.622

4.  Transmembrane helix structure, dynamics, and interactions: multi-nanosecond molecular dynamics simulations.

Authors:  L Shen; D Bassolino; T Stouch
Journal:  Biophys J       Date:  1997-07       Impact factor: 4.033

5.  Binding to the lipid monolayer induces conformational transition in Aβ monomer.

Authors:  Seongwon Kim; Dmitri K Klimov
Journal:  J Mol Model       Date:  2012-09-29       Impact factor: 1.810

6.  Molecular dynamics simulations of E. coli MsbA transmembrane domain: formation of a semipore structure.

Authors:  David Y Haubertin; Hocine Madaoui; Alain Sanson; Raphaël Guérois; Stéphane Orlowski
Journal:  Biophys J       Date:  2006-06-16       Impact factor: 4.033

7.  Molecular simulation study of structural and dynamic properties of mixed DPPC/DPPE bilayers.

Authors:  Sukit Leekumjorn; Amadeu K Sum
Journal:  Biophys J       Date:  2006-03-13       Impact factor: 4.033

8.  Molecular dynamics investigation of bond ordering of unsaturated lipids in monolayers.

Authors:  A L Rabinovich; P O Ripatti; N K Balabaev
Journal:  J Biol Phys       Date:  1999-06       Impact factor: 1.365

9.  Experimental and computational studies investigating trehalose protection of HepG2 cells from palmitate-induced toxicity.

Authors:  Sukit Leekumjorn; Yifei Wu; Amadeu K Sum; Christina Chan
Journal:  Biophys J       Date:  2007-12-20       Impact factor: 4.033

10.  Molecular dynamics simulation of lipid reorientation at bilayer edges.

Authors:  Peter M Kasson; Vijay S Pande
Journal:  Biophys J       Date:  2004-06       Impact factor: 4.033

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