Literature DB >> 7937957

Conformational isomerism and the diversity of antibodies.

J Foote1, C Milstein.   

Abstract

The fact that one cell encodes a single antibody sequence does not necessarily mean that the resulting antibody folds into a single structure, although this is a common assumption. Here we challenge this view and suggest that many antibodies do not have a single conformation at the combining site. The basis for this proposal comes from the kinetic analysis of a set of murine hybridomas derived from defined stages of the immune response to 2-phenyl-5-oxazolone (Ox). Among them we have identified three antibodies that exhibit complex hapten-binding kinetics. We observed biphasic or triphasic reactions in stopped-flow fluorescence experiments, indicating that ligand binding involved isomerization, as well as associative steps. The existence of an equilibrium between at least two antibody conformations, with ligands binding preferentially to one form, was deduced from the variation with hapten concentration of the apparent rate of each phase.

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Year:  1994        PMID: 7937957      PMCID: PMC45021          DOI: 10.1073/pnas.91.22.10370

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  20 in total

1.  Genes and antibodies.

Authors:  J LEDERBERG
Journal:  Science       Date:  1959-06-19       Impact factor: 47.728

Review 2.  Mutation drift and repertoire shift in the maturation of the immune response.

Authors:  C Berek; C Milstein
Journal:  Immunol Rev       Date:  1987-04       Impact factor: 12.988

3.  Molecular events during maturation of the immune response to oxazolone.

Authors:  C Berek; G M Griffiths; C Milstein
Journal:  Nature       Date:  1985 Aug 1-7       Impact factor: 49.962

Review 4.  Somatic generation of antibody diversity.

Authors:  S Tonegawa
Journal:  Nature       Date:  1983-04-14       Impact factor: 49.962

5.  A common mechanism of hapten binding to immunoglobulins and their heterologous chain recombinants.

Authors:  R Zidovetzki; Y Blatt; C P Glaudemans; B N Manjula; I Pecht
Journal:  Biochemistry       Date:  1980-06-10       Impact factor: 3.162

6.  mRNA sequences define an unusually restricted IgG response to 2-phenyloxazolone and its early diversification.

Authors:  M Kaartinen; G M Griffiths; A F Markham; C Milstein
Journal:  Nature       Date:  1983 Jul 28-Aug 3       Impact factor: 49.962

7.  Somatic mutation and the maturation of immune response to 2-phenyl oxazolone.

Authors:  G M Griffiths; C Berek; M Kaartinen; C Milstein
Journal:  Nature       Date:  1984 Nov 15-21       Impact factor: 49.962

8.  Kinetic evidence for hapten-induced conformational transition in immunoglobin MOPC 460.

Authors:  D Lancet; I Pecht
Journal:  Proc Natl Acad Sci U S A       Date:  1976-10       Impact factor: 11.205

9.  Mechanisms of ligand binding by monoclonal anti-fluorescyl antibodies.

Authors:  D M Kranz; J N Herron; E W Voss
Journal:  J Biol Chem       Date:  1982-06-25       Impact factor: 5.157

10.  Inheritance of antibody specificity V. Anti-2-phenyloxazolone in the mouse.

Authors:  O Näkelä; M Kaartinen; J L Pelkonen; K Karjalainen
Journal:  J Exp Med       Date:  1978-12-01       Impact factor: 14.307

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  89 in total

Review 1.  Folding funnels, binding funnels, and protein function.

Authors:  C J Tsai; S Kumar; B Ma; R Nussinov
Journal:  Protein Sci       Date:  1999-06       Impact factor: 6.725

Review 2.  Folding and binding cascades: dynamic landscapes and population shifts.

Authors:  S Kumar; B Ma; C J Tsai; N Sinha; R Nussinov
Journal:  Protein Sci       Date:  2000-01       Impact factor: 6.725

3.  Changes in structure and dynamics of the Fv fragment of a catalytic antibody upon binding of inhibitor.

Authors:  Gerard J A Kroon; Huaping Mo; Maria A Martinez-Yamout; H Jane Dyson; Peter E Wright
Journal:  Protein Sci       Date:  2003-07       Impact factor: 6.725

4.  Sequence-specific binding of normal serum immunoglobulin M to exposed protein C-termini.

Authors:  Alex V Sokoloff; Marissa Puckett; James J Ludtke; Bryan Fetterly
Journal:  Immunology       Date:  2004-06       Impact factor: 7.397

5.  Protein dynamics and the immunological evolution of molecular recognition.

Authors:  Ralph Jimenez; Georgina Salazar; Jun Yin; Taiha Joo; Floyd E Romesberg
Journal:  Proc Natl Acad Sci U S A       Date:  2004-03-04       Impact factor: 11.205

Review 6.  Polyreactive antibodies in adaptive immune responses to viruses.

Authors:  Hugo Mouquet; Michel C Nussenzweig
Journal:  Cell Mol Life Sci       Date:  2011-11-02       Impact factor: 9.261

7.  Kinetic asymmetry of subunit exchange of homooligomeric protein as revealed by deuteration-assisted small-angle neutron scattering.

Authors:  Masaaki Sugiyama; Eiji Kurimoto; Hirokazu Yagi; Kazuhiro Mori; Toshiharu Fukunaga; Mitsuhiro Hirai; Giuseppe Zaccai; Koichi Kato
Journal:  Biophys J       Date:  2011-10-19       Impact factor: 4.033

8.  Evolving concepts of specificity in immune reactions.

Authors:  Herman N Eisen; Arup K Chakraborty
Journal:  Proc Natl Acad Sci U S A       Date:  2010-12-20       Impact factor: 11.205

9.  Three quaternary structures for a single protein.

Authors:  D B Huang; C F Ainsworth; F J Stevens; M Schiffer
Journal:  Proc Natl Acad Sci U S A       Date:  1996-07-09       Impact factor: 11.205

10.  Insights into the dynamics of specific telomeric single-stranded DNA recognition by Pot1pN.

Authors:  Johnny E Croy; Deborah S Wuttke
Journal:  J Mol Biol       Date:  2009-02-13       Impact factor: 5.469

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