Literature DB >> 7937062

The SWISS-PROT protein sequence data bank: current status.

A Bairoch1, B Boeckmann.   

Abstract

SWISS-PROT is an annotated protein sequence database established in 1986 and maintained collaboratively, since 1988, by the Department of Medical Biochemistry of the University of Geneva and the EMBL Data Library. The SWISS-PROT protein sequence data bank consist of sequence entries. Sequence entries are composed of different lines types, each with their own format. For standardization purposes the format of SWISS-PROT follows as closely as possible that of the EMBL Nucleotide Sequence Database. A sample SWISS-PROT entry is shown in Figure 1.

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Year:  1994        PMID: 7937062      PMCID: PMC308324     

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  10 in total

1.  Structure of the arylsulfatase A gene.

Authors:  J Kreysing; K von Figura; V Gieselmann
Journal:  Eur J Biochem       Date:  1990-08-17

2.  The EMBL Network File Server.

Authors:  P J Stoehr; R A Omond
Journal:  Nucleic Acids Res       Date:  1989-08-25       Impact factor: 16.971

3.  Arylsulfatase A pseudodeficiency: loss of a polyadenylylation signal and N-glycosylation site.

Authors:  V Gieselmann; A Polten; J Kreysing; K von Figura
Journal:  Proc Natl Acad Sci U S A       Date:  1989-12       Impact factor: 11.205

4.  Identification of a mutation in the arylsulfatase A gene of a patient with adult-type metachromatic leukodystrophy.

Authors:  R Kondo; N Wakamatsu; H Yoshino; N Fukuhara; T Miyatake; S Tsuji
Journal:  Am J Hum Genet       Date:  1991-05       Impact factor: 11.025

5.  The EMBL data library.

Authors:  C M Rice; R Fuchs; D G Higgins; P J Stoehr; G N Cameron
Journal:  Nucleic Acids Res       Date:  1993-07-01       Impact factor: 16.971

6.  A new generation of information retrieval tools for biologists: the example of the ExPASy WWW server.

Authors:  R D Appel; A Bairoch; D F Hochstrasser
Journal:  Trends Biochem Sci       Date:  1994-06       Impact factor: 13.807

7.  Mutations in the arylsulfatase A pseudodeficiency allele causing metachromatic leukodystrophy.

Authors:  V Gieselmann; A L Fluharty; T Tønnesen; K Von Figura
Journal:  Am J Hum Genet       Date:  1991-08       Impact factor: 11.025

8.  High residual arylsulfatase A (ARSA) activity in a patient with late-infantile metachromatic leukodystrophy.

Authors:  J Kreysing; W Bohne; C Bösenberg; S Marchesini; J C Turpin; N Baumann; K von Figura; V Gieselmann
Journal:  Am J Hum Genet       Date:  1993-08       Impact factor: 11.025

9.  An arylsulfatase A (ARSA) missense mutation (T274M) causing late-infantile metachromatic leukodystrophy.

Authors:  J S Harvey; P V Nelson; W F Carey; E F Robertson; C P Morris
Journal:  Hum Mutat       Date:  1993       Impact factor: 4.878

10.  Late-onset metachromatic leukodystrophy: molecular pathology in two siblings.

Authors:  J Kappler; K von Figura; V Gieselmann
Journal:  Ann Neurol       Date:  1992-03       Impact factor: 10.422

  10 in total
  63 in total

1.  Molecular modeling study of the differential ligand-receptor interaction at the mu, delta and kappa opioid receptors.

Authors:  M Filizola; M Carteni-Farina; J J Perez
Journal:  J Comput Aided Mol Des       Date:  1999-07       Impact factor: 3.686

2.  The Protein Data Bank: unifying the archive.

Authors:  John Westbrook; Zukang Feng; Shri Jain; T N Bhat; Narmada Thanki; Veerasamy Ravichandran; Gary L Gilliland; Wolfgang Bluhm; Helge Weissig; Douglas S Greer; Philip E Bourne; Helen M Berman
Journal:  Nucleic Acids Res       Date:  2002-01-01       Impact factor: 16.971

3.  E-MSD: an integrated data resource for bioinformatics.

Authors:  A Golovin; T J Oldfield; J G Tate; S Velankar; G J Barton; H Boutselakis; D Dimitropoulos; J Fillon; A Hussain; J M C Ionides; M John; P A Keller; E Krissinel; P McNeil; A Naim; R Newman; A Pajon; J Pineda; A Rachedi; J Copeland; A Sitnov; S Sobhany; A Suarez-Uruena; G J Swaminathan; M Tagari; S Tromm; W Vranken; K Henrick
Journal:  Nucleic Acids Res       Date:  2004-01-01       Impact factor: 16.971

4.  E-MSD: the European Bioinformatics Institute Macromolecular Structure Database.

Authors:  H Boutselakis; D Dimitropoulos; J Fillon; A Golovin; K Henrick; A Hussain; J Ionides; M John; P A Keller; E Krissinel; P McNeil; A Naim; R Newman; T Oldfield; J Pineda; A Rachedi; J Copeland; A Sitnov; S Sobhany; A Suarez-Uruena; J Swaminathan; M Tagari; J Tate; S Tromm; S Velankar; W Vranken
Journal:  Nucleic Acids Res       Date:  2003-01-01       Impact factor: 16.971

5.  Bacterial classifications derived from recA protein sequence comparisons.

Authors:  S Karlin; G M Weinstock; V Brendel
Journal:  J Bacteriol       Date:  1995-12       Impact factor: 3.490

Review 6.  Computational methods for exon detection.

Authors:  J M Claverie
Journal:  Mol Biotechnol       Date:  1998-08       Impact factor: 2.695

7.  Do "antisense proteins" exist?

Authors:  K C Chou; C T Zhang; D W Elrod
Journal:  J Protein Chem       Date:  1996-01

8.  Topology prediction for helical transmembrane proteins at 86% accuracy.

Authors:  B Rost; P Fariselli; R Casadio
Journal:  Protein Sci       Date:  1996-08       Impact factor: 6.725

9.  Evidence for nonrandom hydrophobicity structures in protein chains.

Authors:  A Irbäck; C Peterson; F Potthast
Journal:  Proc Natl Acad Sci U S A       Date:  1996-09-03       Impact factor: 11.205

10.  Determination of the amino acid requirements for a protein hinge in triosephosphate isomerase.

Authors:  J Sun; N S Sampson
Journal:  Protein Sci       Date:  1998-07       Impact factor: 6.725

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