Literature DB >> 7932778

Promiscuous mitochondrial group II intron sequences in plant nuclear genomes.

V Knoop1, A Brennicke.   

Abstract

Gene translocations from the organelles to the nucleus are postulated by the endosymbiont hypothesis. We here report evidence for sequence insertions in the nuclear genomes of plants that are derived from noncoding regions of the mitochondrial genome. Fragments of mitochondrial group II introns are identified in the nuclear genomes of tobacco and a bean species. The duplicated intron sequences of 75-140 bp are derived from cis- and trans-splicing introns of genes encoding subunits 1 and 5 of the NADH dehydrogenase. The mitochondrial sequences are inserted in the vicinities of a lectin gene, different glucanase genes and a gene encoding a subunit of photosystem II. Sequence similarities between the nuclear and mitochondrial copies are in the range of 80 to 97%, suggesting recent transfer events that occurred in the basic glucanase genes before and in the lectin gene after the gene duplications in the evolution of the nuclear gene families. Overlapping regions of the same introns are in two instances also involved in intramitochondrial sequence duplications.

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Year:  1994        PMID: 7932778     DOI: 10.1007/bf00163803

Source DB:  PubMed          Journal:  J Mol Evol        ISSN: 0022-2844            Impact factor:   2.395


  28 in total

1.  The mitochondrial nad5 gene of sugar beet (Beta vulgaris) encoding a subunit of the respiratory NADH dehydrogenase.

Authors:  W Ecke; U Schmitz; G Michaelis
Journal:  Curr Genet       Date:  1990-08       Impact factor: 3.886

2.  A mitochondrial intron sequence in the 5'-flanking region of a plant nuclear lectin gene.

Authors:  V Knoop; A Brennicke
Journal:  Curr Genet       Date:  1991-11       Impact factor: 3.886

3.  Nucleotide sequence of gene oee2-A and its cDNA encoding 23 kDa polypeptide of the oxygen-evolving complex of photosystem II in tobacco.

Authors:  S B Hua; S K Dube; N M Barnett; S D Kung
Journal:  Plant Mol Biol       Date:  1991-09       Impact factor: 4.076

Review 4.  The mitochondrial genome on its way to the nucleus: different stages of gene transfer in higher plants.

Authors:  A Brennicke; L Grohmann; R Hiesel; V Knoop; W Schuster
Journal:  FEBS Lett       Date:  1993-06-28       Impact factor: 4.124

5.  Improved tools for biological sequence comparison.

Authors:  W R Pearson; D J Lipman
Journal:  Proc Natl Acad Sci U S A       Date:  1988-04       Impact factor: 11.205

6.  Plastid DNA sequence homologies in the tobacco nuclear genome.

Authors:  M A Ayliffe; J N Timmis
Journal:  Mol Gen Genet       Date:  1992-12

7.  The mitochondrial gene encoding ribosomal protein S12 has been translocated to the nuclear genome in Oenothera.

Authors:  L Grohmann; A Brennicke; W Schuster
Journal:  Nucleic Acids Res       Date:  1992-11-11       Impact factor: 16.971

8.  Recent stable insertion of mitochondrial DNA into an Arabidopsis polyubiquitin gene by nonhomologous recombination.

Authors:  C W Sun; J Callis
Journal:  Plant Cell       Date:  1993-01       Impact factor: 11.277

9.  Trans splicing integrates an exon of 22 nucleotides into the nad5 mRNA in higher plant mitochondria.

Authors:  V Knoop; W Schuster; B Wissinger; A Brennicke
Journal:  EMBO J       Date:  1991-11       Impact factor: 11.598

10.  The NCS3 mutation: genetic evidence for the expression of ribosomal protein genes in Zea mays mitochondria.

Authors:  M D Hunt; K J Newton
Journal:  EMBO J       Date:  1991-05       Impact factor: 11.598

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  9 in total

1.  Group II introns in eubacteria and archaea: ORF-less introns and new varieties.

Authors:  Dawn M Simon; Nicholas A C Clarke; Bonnie A McNeil; Ian Johnson; Davin Pantuso; Lixin Dai; Dinggeng Chai; Steven Zimmerly
Journal:  RNA       Date:  2008-08-01       Impact factor: 4.942

2.  Evolution of trans-splicing plant mitochondrial introns in pre-Permian times.

Authors:  O Malek; A Brennicke; V Knoop
Journal:  Proc Natl Acad Sci U S A       Date:  1997-01-21       Impact factor: 11.205

3.  Pervasive migration of organellar DNA to the nucleus in plants.

Authors:  J L Blanchard; G W Schmidt
Journal:  J Mol Evol       Date:  1995-10       Impact factor: 2.395

4.  Genes for two mitochondrial ribosomal proteins in flowering plants are derived from their chloroplast or cytosolic counterparts.

Authors:  Keith L Adams; Daniel O Daley; James Whelan; Jeffrey D Palmer
Journal:  Plant Cell       Date:  2002-04       Impact factor: 11.277

Review 5.  The mitochondrial DNA of land plants: peculiarities in phylogenetic perspective.

Authors:  Volker Knoop
Journal:  Curr Genet       Date:  2004-08-06       Impact factor: 3.886

6.  Phylogenetic inference in Rafflesiales: the influence of rate heterogeneity and horizontal gene transfer.

Authors:  Daniel L Nickrent; Albert Blarer; Yin-Long Qiu; Romina Vidal-Russell; Frank E Anderson
Journal:  BMC Evol Biol       Date:  2004-10-20       Impact factor: 3.260

7.  Evolution of group II introns.

Authors:  Steven Zimmerly; Cameron Semper
Journal:  Mob DNA       Date:  2015-04-01

8.  Comparative Analysis of Four Calypogeia Species Revealed Unexpected Change in Evolutionarily-Stable Liverwort Mitogenomes.

Authors:  Monika Ślipiko; Kamil Myszczyński; Katarzyna Buczkowska-Chmielewska; Alina Bączkiewicz; Monika Szczecińska; Jakub Sawicki
Journal:  Genes (Basel)       Date:  2017-12-19       Impact factor: 4.096

9.  A diversity of uncharacterized reverse transcriptases in bacteria.

Authors:  Dawn M Simon; Steven Zimmerly
Journal:  Nucleic Acids Res       Date:  2008-11-12       Impact factor: 16.971

  9 in total

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