Literature DB >> 7929175

tRNA splicing in yeast and wheat germ. A cyclic phosphodiesterase implicated in the metabolism of ADP-ribose 1",2"-cyclic phosphate.

G M Culver1, S A Consaul, K T Tycowski, W Filipowicz, E M Phizicky.   

Abstract

Adenosine diphosphate (ADP)-ribose 1",2"-cyclic phosphate (Appr > p) is produced as a result of transfer RNA (tRNA) splicing in the yeast Saccharomyces cerevisiae and probably in other eukaryotes. Endonucleolytic cleavage and ligation result in a mature length tRNA with a 2'-phosphate at the splice junction. This 2'-phosphate is transferred to NAD to produce Appr > p. Metabolism of Appr > p requires hydrolysis of the 1",2"-cyclic phosphate linkage. We show here that yeast has a unique cyclic phosphodiesterase that can hydrolyze Appr > p, ribose 1,2-cyclic phosphate, and ribose 1,3-cyclic phosphate to the corresponding ribose 1-phosphate derivatives. The cyclic phosphodiesterase is highly specific for Appr > p; there is 20-fold less activity on ribose 1,3-cyclic phosphate and no detectable activity on nucleoside 2',3'-cyclic phosphates. A similar cyclic phosphodiesterase is present in wheat germ. The wheat germ cyclic phosphodiesterase activity co-chromatographs with a 2',3'-cyclic nucleotide 3'-phosphodiesterase that was previously identified and purified. The purified wheat germ enzyme has a distinct preference for Appr > p and ribose cyclic phosphate compared to guanosine 2',3'-cyclic phosphate and shares other biochemical characteristics with the yeast enzyme.

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Year:  1994        PMID: 7929175

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  25 in total

1.  Characterization of the Saccharomyces cerevisiae cyclic nucleotide phosphodiesterase involved in the metabolism of ADP-ribose 1",2"-cyclic phosphate.

Authors:  F Nasr; W Filipowicz
Journal:  Nucleic Acids Res       Date:  2000-04-15       Impact factor: 16.971

2.  Structure and mechanism of activity of the cyclic phosphodiesterase of Appr>p, a product of the tRNA splicing reaction.

Authors:  A Hofmann; A Zdanov; P Genschik; S Ruvinov; W Filipowicz; A Wlodawer
Journal:  EMBO J       Date:  2000-11-15       Impact factor: 11.598

3.  Adenosine diphosphate glucose pyrophosphatase: A plastidial phosphodiesterase that prevents starch biosynthesis.

Authors:  M Rodriguez-López; E Baroja-Fernández; A Zandueta-Criado; J Pozueta-Romero
Journal:  Proc Natl Acad Sci U S A       Date:  2000-07-18       Impact factor: 11.205

4.  Structure and mechanism of ADP-ribose-1''-monophosphatase (Appr-1''-pase), a ubiquitous cellular processing enzyme.

Authors:  Desigan Kumaran; Subramaniam Eswaramoorthy; F William Studier; Subramanyam Swaminathan
Journal:  Protein Sci       Date:  2005-03       Impact factor: 6.725

5.  Traversing the RNA world.

Authors:  Witold Filipowicz
Journal:  J Biol Chem       Date:  2017-04-05       Impact factor: 5.157

6.  ADP-ribose-1"-monophosphatase: a conserved coronavirus enzyme that is dispensable for viral replication in tissue culture.

Authors:  Akos Putics; Witold Filipowicz; Jonathan Hall; Alexander E Gorbalenya; John Ziebuhr
Journal:  J Virol       Date:  2005-10       Impact factor: 5.103

7.  Induction of an extracellular cyclic nucleotide phosphodiesterase as an accessory ribonucleolytic activity during phosphate starvation of cultured tomato cells.

Authors:  S Abel; T Nürnberger; V Ahnert; G J Krauss; K Glund
Journal:  Plant Physiol       Date:  2000-02       Impact factor: 8.340

8.  YmdB: a stress-responsive ribonuclease-binding regulator of E. coli RNase III activity.

Authors:  Kwang-sun Kim; Robert Manasherob; Stanley N Cohen
Journal:  Genes Dev       Date:  2008-12-15       Impact factor: 11.361

9.  A functional homolog of a yeast tRNA splicing enzyme is conserved in higher eukaryotes and in Escherichia coli.

Authors:  S L Spinelli; H S Malik; S A Consaul; E M Phizicky
Journal:  Proc Natl Acad Sci U S A       Date:  1998-11-24       Impact factor: 11.205

10.  Crystal structures of the X-domains of a Group-1 and a Group-3 coronavirus reveal that ADP-ribose-binding may not be a conserved property.

Authors:  Yvonne Piotrowski; Guido Hansen; A Linda Boomaars-van der Zanden; Eric J Snijder; Alexander E Gorbalenya; Rolf Hilgenfeld
Journal:  Protein Sci       Date:  2009-01       Impact factor: 6.725

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