Literature DB >> 7922685

A comparison of Radial Basis Function and backpropagation neural networks for identification of marine phytoplankton from multivariate flow cytometry data.

M F Wilkins1, C W Morris, L Boddy.   

Abstract

Two artificial neural network classifiers, the well-known Multi-layer Perception (MLP) (also known as the 'backpropagation network'), and the more recently developed Radial Basis Function (RBF) network, were evaluated and compared for their ability to identify multivariate flow cytometric data from five North Sea plankton groups (Dinoflagellidae, Bacillariophyceae, Prymnesiomonadida, Cryptomonadida, and other flagellates). RBF networks generally performed similarly to MLPs, and slightly better in cases where the data were markedly multimodal; RBF networks also have much shorter training times. The performance of MLPs was improved greatly by the use of a symmetrical bipolar 'transfer function' as opposed to the commonly-used asymmetric form. The issues of network optimisation and computational efficiency in use are discussed.

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Year:  1994        PMID: 7922685     DOI: 10.1093/bioinformatics/10.3.285

Source DB:  PubMed          Journal:  Comput Appl Biosci        ISSN: 0266-7061


  7 in total

1.  Identification of phytoplankton from flow cytometry data by using radial basis function neural networks.

Authors:  M F Wilkins; L Boddy; C W Morris; R R Jonker
Journal:  Appl Environ Microbiol       Date:  1999-10       Impact factor: 4.792

Review 2.  Flow cytometry and cell sorting of heterogeneous microbial populations: the importance of single-cell analyses.

Authors:  H M Davey; D B Kell
Journal:  Microbiol Rev       Date:  1996-12

3.  An artificial neural network approach to diagnosing epilepsy using lateralized bursts of theta EEGs.

Authors:  S Walczak; W J Nowack
Journal:  J Med Syst       Date:  2001-02       Impact factor: 4.460

4.  A radial basis classifier for the automatic detection of aspiration in children with dysphagia.

Authors:  Joon Lee; Stefanie Blain; Mike Casas; Dave Kenny; Glenn Berall; Tom Chau
Journal:  J Neuroeng Rehabil       Date:  2006-07-17       Impact factor: 4.262

5.  Combining high-throughput imaging flow cytometry and deep learning for efficient species and life-cycle stage identification of phytoplankton.

Authors:  Susanne Dunker; David Boho; Jana Wäldchen; Patrick Mäder
Journal:  BMC Ecol       Date:  2018-12-03       Impact factor: 2.964

6.  A comparative evaluation of the generalised predictive ability of eight machine learning algorithms across ten clinical metabolomics data sets for binary classification.

Authors:  Kevin M Mendez; Stacey N Reinke; David I Broadhurst
Journal:  Metabolomics       Date:  2019-11-15       Impact factor: 4.290

7.  Migrating from partial least squares discriminant analysis to artificial neural networks: a comparison of functionally equivalent visualisation and feature contribution tools using jupyter notebooks.

Authors:  Kevin M Mendez; David I Broadhurst; Stacey N Reinke
Journal:  Metabolomics       Date:  2020-01-21       Impact factor: 4.290

  7 in total

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