Literature DB >> 7916670

Unusually compact ribosomal RNA gene cluster in Sphaeronaemella fimicola.

G Hausner1, G R Klassen, J Reid.   

Abstract

The ribosomal DNA repeat unit of Sphaeronaemella fimicola was found to be a 13.7-kb tandem repeat with a relatively long nontranscribed spacer (NTS) and an unusually compact ribosomal RNA gene cluster. The DNA sequence of an 850-bp PCR amplification product containing the 3' end of the small subunit rRNA (SSrRNA) gene, the 5.8s gene, and the 5' end of the large subunit rRNA (LSrRNA) gene was determined. The putative internal spacers flanking the 5.8s RNA gene could be the shortest yet noted for any fungus, totaling only 102 bases.

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Year:  1993        PMID： 7916670     DOI： 10.1007/bf00310899

Source DB:  PubMed          Journal:  Curr Genet        ISSN： 0172-8083            Impact factor:   3.886


  21 in total

1.  Primary structure of the Neurospora crassa small subunit ribosomal RNA coding region.

Authors:  M L Sogin; K Miotto; L Miller
Journal:  Nucleic Acids Res       Date:  1986-12-09       Impact factor: 16.971

2.  The nucleotide sequence of the intergenic region between the 5.8S and 26S rRNA genes of the yeast ribosomal RNA operon. Possible implications for the interaction between 5.8S and 26S rRNA and the processing of the primary transcript.

Authors:  G M Veldman; J Klootwijk; H van Heerikhuizen; R J Planta
Journal:  Nucleic Acids Res       Date:  1981-10-10       Impact factor: 16.971

3.  Chemical modification studies and the secondary structure of HeLa cell 5.8S rRNA.

Authors:  J M Kelly; B E Maden
Journal:  Nucleic Acids Res       Date:  1980-10-10       Impact factor: 16.971

4.  Neurospora crassa ribosomal DNA: sequence of internal transcribed spacer and comparison with N. intermedia and N. sitophila.

Authors:  C Chambers; S K Dutta; R J Crouch
Journal:  Gene       Date:  1986       Impact factor: 3.688

5.  The 5.8S RNA gene sequence and the ribosomal repeat of Schizosaccharomyces pombe.

Authors:  J Schaak; J Mao; D Söll
Journal:  Nucleic Acids Res       Date:  1982-05-11       Impact factor: 16.971

6.  Functional analysis of internal transcribed spacer 2 of Saccharomyces cerevisiae ribosomal DNA.

Authors:  C A van der Sande; M Kwa; R W van Nues; H van Heerikhuizen; H A Raué; R J Planta
Journal:  J Mol Biol       Date:  1992-02-20       Impact factor: 5.469

7.  Organization of the ribosomal ribonucleic acid genes in various wild-type strains and wild-collected strains of Neurospora.

Authors:  P J Russell; S Wagner; K D Rodland; R L Feinbaum; J P Russell; M S Bret-Harte; S J Free; R L Metzenberg
Journal:  Mol Gen Genet       Date:  1984

8.  Structure of mouse rRNA precursors. Complete sequence and potential folding of the spacer regions between 18S and 28S rRNA.

Authors:  B Michot; J P Bachellerie; F Raynal
Journal:  Nucleic Acids Res       Date:  1983-05-25       Impact factor: 16.971

9.  The nucleotide sequence at the 3'-end of Neurospora crassa 25S-rRNA and the location of a 5.8S-rRNA binding site.

Authors:  J M Kelly; R A Cox
Journal:  Nucleic Acids Res       Date:  1981-03-11       Impact factor: 16.971

10.  Functional analysis of transcribed spacers of yeast ribosomal DNA.

Authors:  W Musters; K Boon; C A van der Sande; H van Heerikhuizen; R J Planta
Journal:  EMBO J       Date:  1990-12       Impact factor: 11.598
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  1 in total

1.  Evolution of nuclear rDNA ITS sequences in the Cladophora albida/sericea clade (Chlorophyta).

Authors:  F T Bakker; J L Olsen; W T Stam
Journal:  J Mol Evol       Date:  1995-06       Impact factor: 2.395
  1 in total

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