Literature DB >> 7888755

Codon usage and genome evolution.

P M Sharp1, G Matassi.   

Abstract

The rates and patterns of evolution at silent sites in codons reveal much about the basic features of molecular evolution. Recent increases in the amount of sequence data available for various species and more precise knowledge of the chromosomal locations of those sequences, coming in particular from genome projects, reveal that some features of molecular evolution vary around the genome.

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Year:  1994        PMID： 7888755     DOI： 10.1016/0959-437x(94)90070-1

Source DB:  PubMed          Journal:  Curr Opin Genet Dev        ISSN： 0959-437X            Impact factor:   5.578


  63 in total

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Authors:  F Partensky; W R Hess; D Vaulot
Journal:  Microbiol Mol Biol Rev       Date:  1999-03       Impact factor: 11.056

2.  Evolution of circulating wild poliovirus and of vaccine-derived poliovirus in an immunodeficient patient: a unifying model.

Authors:  G V Gavrilin; E A Cherkasova; G Y Lipskaya; O M Kew; V I Agol
Journal:  J Virol       Date:  2000-08       Impact factor: 5.103

3.  Recombination rate and the distribution of transposable elements in the Drosophila melanogaster genome.

Authors:  Carène Rizzon; Gabriel Marais; Manolo Gouy; Christian Biémont
Journal:  Genome Res       Date:  2002-03       Impact factor: 9.043

4.  Predicted highly expressed genes of diverse prokaryotic genomes.

Authors:  S Karlin; J Mrázek
Journal:  J Bacteriol       Date:  2000-09       Impact factor: 3.490

5.  Revisiting the codon adaptation index from a whole-genome perspective: analyzing the relationship between gene expression and codon occurrence in yeast using a variety of models.

Authors:  Ronald Jansen; Harmen J Bussemaker; Mark Gerstein
Journal:  Nucleic Acids Res       Date:  2003-04-15       Impact factor: 16.971

6.  Conservation of the relative tRNA composition in healthy and cancerous tissues.

Authors:  Shelly Mahlab; Tamir Tuller; Michal Linial
Journal:  RNA       Date:  2012-02-22       Impact factor: 4.942

Review 7.  Statistical signals in bioinformatics.

Authors:  Samuel Karlin
Journal:  Proc Natl Acad Sci U S A       Date:  2005-09-12       Impact factor: 11.205

8.  Global mRNA stability is not associated with levels of gene expression in Drosophila melanogaster but shows a negative correlation with codon bias.

Authors:  Hans K Stenøien; Wolfgang Stephan
Journal:  J Mol Evol       Date:  2005-07-21       Impact factor: 2.395

9.  Relaxation of yeast mitochondrial functions after whole-genome duplication.

Authors:  Huifeng Jiang; Wenjun Guan; David Pinney; Wen Wang; Zhenglong Gu
Journal:  Genome Res       Date:  2008-07-30       Impact factor: 9.043

10.  Exploring Lactobacillus plantarum genome diversity by using microarrays.

Authors:  Douwe Molenaar; Françoise Bringel; Frank H Schuren; Willem M de Vos; Roland J Siezen; Michiel Kleerebezem
Journal:  J Bacteriol       Date:  2005-09       Impact factor: 3.490
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