Literature DB >> 7884881

Intraspecific phylogenetics: support for dental transmission of human immunodeficiency virus.

K A Crandall1.   

Abstract

A new method to estimate within-species gene genealogies was used to establish linkages among individuals associated with the Florida dental human immunodeficiency virus transmission case. Phylogenetic relationships were estimated from 103 nucleotide sequences from the V3 region of the env gene representing the Florida dentist, eight of his seropositive patients, and many local controls. The cladogram estimation procedure supports linkages among individuals within the previously described dental clade, whereas local controls and other patients form independent networks or are outliers in the main network, indicating more distant evolutionary relationships. A nested statistical analysis also indicates significant cohesion of the dental clade group.

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Year:  1995        PMID： 7884881      PMCID： PMC188907     

Source DB:  PubMed          Journal:  J Virol        ISSN： 0022-538X            Impact factor:   5.103


  14 in total

1.  A cladistic analysis of phenotypic associations with haplotypes inferred from restriction endonuclease mapping and DNA sequence data. III. Cladogram estimation.

Authors:  A R Templeton; K A Crandall; C F Sing
Journal:  Genetics       Date:  1992-10       Impact factor: 4.562

2.  Application of cladistics to the analysis of genotype-phenotype relationships.

Authors:  C F Sing; M B Haviland; K E Zerba; A R Templeton
Journal:  Eur J Epidemiol       Date:  1992-05       Impact factor: 8.082

3.  Statistical properties of bootstrap estimation of phylogenetic variability from nucleotide sequences: II. Four taxa without a molecular clock.

Authors:  A Zharkikh; W H Li
Journal:  J Mol Evol       Date:  1992-10       Impact factor: 2.395

4.  Statistical properties of bootstrap estimation of phylogenetic variability from nucleotide sequences. I. Four taxa with a molecular clock.

Authors:  A Zharkikh; W H Li
Journal:  Mol Biol Evol       Date:  1992-11       Impact factor: 16.240

5.  A cladistic analysis of phenotypic associations with haplotypes inferred from restriction endonuclease mapping. I. Basic theory and an analysis of alcohol dehydrogenase activity in Drosophila.

Authors:  A R Templeton; E Boerwinkle; C F Sing
Journal:  Genetics       Date:  1987-10       Impact factor: 4.562

6.  Molecular epidemiology of HIV transmission in a dental practice.

Authors:  C Y Ou; C A Ciesielski; G Myers; C I Bandea; C C Luo; B T Korber; J I Mullins; G Schochetman; R L Berkelman; A N Economou
Journal:  Science       Date:  1992-05-22       Impact factor: 47.728

7.  The statistical analysis of mitochondrial DNA polymorphisms: chi 2 and the problem of small samples.

Authors:  D A Roff; P Bentzen
Journal:  Mol Biol Evol       Date:  1989-09       Impact factor: 16.240

8.  Dental HIV transmission?

Authors:  R W DeBry; L G Abele; S H Weiss; M D Hill; M Bouzas; E Lorenzo; F Graebnitz; L Resnick
Journal:  Nature       Date:  1993-02-25       Impact factor: 49.962

9.  Empirical tests of some predictions from coalescent theory with applications to intraspecific phylogeny reconstruction.

Authors:  K A Crandall; A R Templeton
Journal:  Genetics       Date:  1993-07       Impact factor: 4.562

10.  A cladistic analysis of phenotypic associations with haplotypes inferred from restriction endonuclease mapping. IV. Nested analyses with cladogram uncertainty and recombination.

Authors:  A R Templeton; C F Sing
Journal:  Genetics       Date:  1993-06       Impact factor: 4.562
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  7 in total

1.  Phylogenetic analyses indicate an atypical nurse-to-patient transmission of human immunodeficiency virus type 1.

Authors:  C P Goujon; V M Schneider; J Grofti; J Montigny; V Jeantils; P Astagneau; W Rozenbaum; F Lot; C Frocrain-Herchkovitch; N Delphin; F Le Gal; J C Nicolas; M C Milinkovitch; P Dény
Journal:  J Virol       Date:  2000-03       Impact factor: 5.103

2.  The explosive human immunodeficiency virus type 1 epidemic among injecting drug users of Kathmandu, Nepal, is caused by a subtype C virus of restricted genetic diversity.

Authors:  R B Oelrichs; I L Shrestha; D A Anderson; N J Deacon
Journal:  J Virol       Date:  2000-02       Impact factor: 5.103

3.  On the phylogenetic placement of human T cell leukemia virus type 1 sequences associated with an Andean mummy.

Authors:  Michael B Coulthart; David Posada; Keith A Crandall; Gregory A Dekaban
Journal:  Infect Genet Evol       Date:  2005-03-23       Impact factor: 3.342

4.  The HIV-positive dentist: balancing the rights of the health care worker and the patient.

Authors:  M A Gardam; W F Flanagan; I E Salit
Journal:  CMAJ       Date:  2001-06-12       Impact factor: 8.262

5.  Selective transmission of human immunodeficiency virus type 1 variants to SCID mice reconstituted with human peripheral blood monoclonal cells.

Authors:  R B Markham; D H Schwartz; A Templeton; J B Margolick; H Farzadegan; D Vlahov; X F Yu
Journal:  J Virol       Date:  1996-10       Impact factor: 5.103

6.  Molecular epidemiology identifies only a single rabies virus variant circulating in complex carnivore communities of the Serengeti.

Authors:  T Lembo; D T Haydon; A Velasco-Villa; C E Rupprecht; C Packer; P E Brandão; I V Kuzmin; A R Fooks; J Barrat; S Cleaveland
Journal:  Proc Biol Sci       Date:  2007-09-07       Impact factor: 5.349

Review 7.  The evolution of HIV: inferences using phylogenetics.

Authors:  Eduardo Castro-Nallar; Marcos Pérez-Losada; Gregory F Burton; Keith A Crandall
Journal:  Mol Phylogenet Evol       Date:  2011-11-27       Impact factor: 4.286
  7 in total

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