Literature DB >> 787935

A comparative X-ray diffraction and circular dichroism study of DNA compact particles formed in water-salt solutions, containing poly(ethylene glycol).

Y M Evdokimov, T L Pyatigorskaya, O F Polyvtsev, N M Akimenko, V A Kadykov, D Y Tsvankin, Y M Varshavsky.   

Abstract

Comparative CD and X-ray diffraction studies of DNA compact particules which were obtained in PEG-containing water-salt solutions, have been carried out. Compact particles, formed from native DNA, produce a psi CD spectrum (characterized by a negative band at lambda-270 nm) and a small-angle X-ray diffraction pattern, which shows two reflections: I at 34-40 A and II at 80-90 A (together with its second-order reflection). Compact particules, formed from DNA molecules with partially disordered secondary structure, do not produce the psi CD spectrum and the reflection I, while the reflection II remains unchanged. It is suggested that the spacing of 34-40 A is associated with a side-by-side packing of DNA fragments in "microcrystallization' regions in compact particules and that such "microcrystallization' accounts for the generation of the psi CD spectrum.

Entities:  

Mesh:

Substances:

Year:  1976        PMID: 787935      PMCID: PMC343090          DOI: 10.1093/nar/3.9.2353

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  17 in total

1.  Kinky helix.

Authors:  F H Crick; A Klug
Journal:  Nature       Date:  1975-06-12       Impact factor: 49.962

2.  Conformation and reactivity of DNA V. pH-dependent conformational changes of DNA in complexes with poly-L-histidine: Transitions from B- to A-form and to a condensed state.

Authors:  G Burckhardt; Ch Zimmer; G Luck
Journal:  FEBS Lett       Date:  1973-02-15       Impact factor: 4.124

3.  Structure and circular dichroism of DNA in concentrated polymer solutions.

Authors:  C F Jordan; L S Lerman; J H Venable
Journal:  Nat New Biol       Date:  1972-03-22

4.  Regular superstructures of purified DNA in ethanolic solutions.

Authors:  D Lang
Journal:  J Mol Biol       Date:  1973-08-05       Impact factor: 5.469

5.  Mie scattering contributions to the optical density and circular dichroism of T2 bacteriophage.

Authors:  G Holzwarth; D G Gordon; J E McGinness; B P Dorman; M F Maestre
Journal:  Biochemistry       Date:  1974-01-01       Impact factor: 3.162

6.  Circular dichroism studies of histone-deoxyribonucleic acid complexes. A comparison of complexes with histone I (f-1), histone IV (f2al), and their mixtures.

Authors:  T Y Shih; G D Fasman
Journal:  Biochemistry       Date:  1972-02-01       Impact factor: 3.162

7.  Model nucleohistones: the interaction of F1 and F2al histones with native T7 DNA.

Authors:  D E Olins; A L Olins
Journal:  J Mol Biol       Date:  1971-05-14       Impact factor: 5.469

8.  On the structure of nucleohistone.

Authors:  S Bram; H Ris
Journal:  J Mol Biol       Date:  1971-02-14       Impact factor: 5.469

9.  Crystallization of DNA from dilute solution.

Authors:  G Giannoni; F J Padden; H D Keith
Journal:  Proc Natl Acad Sci U S A       Date:  1969-03       Impact factor: 11.205

10.  Structure of nucleic acid-poly base complexes.

Authors:  M Haynes; R A Garrett; W B Gratzer
Journal:  Biochemistry       Date:  1970-10-27       Impact factor: 3.162

View more
  13 in total

1.  Na+ shows a markedly higher potential than K+ in DNA compaction in a crowded environment.

Authors:  Anatoly A Zinchenko; Kenichi Yoshikawa
Journal:  Biophys J       Date:  2005-03-18       Impact factor: 4.033

2.  Structure of histone H1-DNA complex: effect of histone H1 on DNA condensation.

Authors:  M W Hsiang; R D Cole
Journal:  Proc Natl Acad Sci U S A       Date:  1977-11       Impact factor: 11.205

3.  Possibility of nonkinked packing of DNA in chromatin.

Authors:  J L Sussman; E N Trifonov
Journal:  Proc Natl Acad Sci U S A       Date:  1978-01       Impact factor: 11.205

4.  Interactions of Hg(II) ions with DNA as revealed by CD measurements.

Authors:  A Walter; G Luck
Journal:  Nucleic Acids Res       Date:  1977-03       Impact factor: 16.971

5.  Study of DNA films by the CD, X-ray and polarization microscopy techniques.

Authors:  V N Potaman; D G Alexeev; A Z Rabinovich; L S Shlyakhtenko
Journal:  Nucleic Acids Res       Date:  1981-01-10       Impact factor: 16.971

6.  The influence of the purine 2-amino group on DNA conformation and stability. Synthesis and conformational analysis of d[T(2-aminoA)]3.

Authors:  B L Gaffney; L A Marky; R A Jones
Journal:  Nucleic Acids Res       Date:  1982-07-24       Impact factor: 16.971

7.  A compact from of methylated DNA is solutions containing poly (ethylene glycol).

Authors:  N M Akimenko; G Burckhardt; V A Kadykov; K A Avakian; Y M Evdokimov; Y M Varshavsky
Journal:  Nucleic Acids Res       Date:  1977-10       Impact factor: 16.971

8.  Conformational transitions of poly(dA-dC).poly(dG-dT) induced by high salt or in ethanolic solution.

Authors:  C Zimmer; S Tymen; C Marck; W Guschlbauer
Journal:  Nucleic Acids Res       Date:  1982-02-11       Impact factor: 16.971

9.  Salt-induced conformational changes of poly(dA-dT).

Authors:  M Vorlícková; J Kypr; V Kleinwächter; E Palecek
Journal:  Nucleic Acids Res       Date:  1980-09-11       Impact factor: 16.971

10.  Polymer- and salt-induced toroids of hexagonal DNA.

Authors:  J Ubbink; T Odijk
Journal:  Biophys J       Date:  1995-01       Impact factor: 4.033

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.