Literature DB >> 7862162

Autoregulated expression of the yeast INO2 and INO4 helix-loop-helix activator genes effects cooperative regulation on their target genes.

B P Ashburner1, J M Lopes.   

Abstract

In the yeast Saccharomyces cerevisiae, the phospholipid biosynthetic genes are highly regulated at the transcriptional level in response to the phospholipid precursors inositol and choline. In the absence of inositol and choline (derepressing), the products of the INO2 and INO4 genes form a heteromeric complex which binds to a 10-bp element, upstream activation sequence INO (UASINO), in the promoters of the phospholipid biosynthetic genes to activate their transcription. In the presence of inositol and choline (repressing), the product of the OPI1 gene represses transcription dictated by the UASINO element. Curiously, we identified a UASINO-like element in the promoters of both the INO2 and INO4 genes. The presence of the UASINO element in these two promoters suggested that the mechanism for the inositol-choline response would involved regulating expression of the two activator genes. Using a cat reporter gene, we find that INO2-cat expression was regulated 12-fold in response to inositol and choline but that INO4-cat was constitutively expressed. We further observed that INO2-cat was not expressed in either an ino2 or an ino4 mutant strain and was constitutively overexpressed in an opi1 mutant strain. Expression of the INO4-cat gene was affected only by mutation in the INO4 gene itself. Therefore, INO2-cat transcription is regulated by the products of both the INO2 and INO4 genes whereas INO4 must interact with another protein to activate its own transcription. Our data show that derepression of phospholipid biosynthetic gene expression involves two mechanisms: increasing the levels of the INO2 and INO4 gene products and inactivating the OPI1-mediated repression mechanism. We propose a model suggesting that this dual mechanism of regulation accounts for the observed cooperative stimulation of IN01 and CH01 gene expression (phospholipids biosynthetic genes).

Entities:  

Mesh:

Substances:

Year:  1995        PMID: 7862162      PMCID: PMC230395          DOI: 10.1128/MCB.15.3.1709

Source DB:  PubMed          Journal:  Mol Cell Biol        ISSN: 0270-7306            Impact factor:   4.272


  49 in total

1.  RTG1 and RTG2: two yeast genes required for a novel path of communication from mitochondria to the nucleus.

Authors:  X Liao; R A Butow
Journal:  Cell       Date:  1993-01-15       Impact factor: 41.582

Review 2.  Myc-Max-Mad: a transcription factor network controlling cell cycle progression, differentiation and death.

Authors:  B Amati; H Land
Journal:  Curr Opin Genet Dev       Date:  1994-02       Impact factor: 5.578

3.  Distinct DNA binding preferences for the c-Myc/Max and Max/Max dimers.

Authors:  D L Solomon; B Amati; H Land
Journal:  Nucleic Acids Res       Date:  1993-11-25       Impact factor: 16.971

4.  A small segment of the MAT alpha 1 transcript promotes mRNA decay in Saccharomyces cerevisiae: a stimulatory role for rare codons.

Authors:  G Caponigro; D Muhlrad; R Parker
Journal:  Mol Cell Biol       Date:  1993-09       Impact factor: 4.272

5.  INO2 and INO4 gene products, positive regulators of phospholipid biosynthesis in Saccharomyces cerevisiae, form a complex that binds to the INO1 promoter.

Authors:  J Ambroziak; S A Henry
Journal:  J Biol Chem       Date:  1994-05-27       Impact factor: 5.157

6.  A pleiotropic phospholipid biosynthetic regulatory mutation in Saccharomyces cerevisiae is allelic to sin3 (sdi1, ume4, rpd1).

Authors:  K A Hudak; J M Lopes; S A Henry
Journal:  Genetics       Date:  1994-02       Impact factor: 4.562

7.  Functional characterization of the INO2 gene of Saccharomyces cerevisiae. A positive regulator of phospholipid biosynthesis.

Authors:  D M Nikoloff; S A Henry
Journal:  J Biol Chem       Date:  1994-03-11       Impact factor: 5.157

8.  Regulatory gene INO4 of yeast phospholipid biosynthesis is positively autoregulated and functions as a transactivator of fatty acid synthase genes FAS1 and FAS2 from Saccharomyces cerevisiae.

Authors:  H J Schüller; R Schorr; B Hoffmann; E Schweizer
Journal:  Nucleic Acids Res       Date:  1992-11-25       Impact factor: 16.971

9.  Co-regulation with genes of phospholipid biosynthesis of the CTR/HNM1-encoded choline/nitrogen mustard permease in Saccharomyces cerevisiae.

Authors:  Z Li; M Brendel
Journal:  Mol Gen Genet       Date:  1993-12

10.  The 5' untranslated region of the PPR1 regulatory gene dictates rapid mRNA decay in yeast.

Authors:  B Pierrat; F Lacroute; R Losson
Journal:  Gene       Date:  1993-09-06       Impact factor: 3.688

View more
  31 in total

1.  Combinatorial regulation of phospholipid biosynthetic gene expression by the UME6, SIN3 and RPD3 genes.

Authors:  M Elkhaimi; M R Kaadige; D Kamath; J C Jackson; H Biliran; J M Lopes
Journal:  Nucleic Acids Res       Date:  2000-08-15       Impact factor: 16.971

2.  Derepression of INO1 transcription requires cooperation between the Ino2p-Ino4p heterodimer and Cbf1p and recruitment of the ISW2 chromatin-remodeling complex.

Authors:  Ameet Shetty; John M Lopes
Journal:  Eukaryot Cell       Date:  2010-10-08

3.  Analysis of Opi1p repressor mutants.

Authors:  Mohan R Kaadige; John M Lopes
Journal:  Curr Genet       Date:  2005-12-02       Impact factor: 3.886

4.  Genome-wide analysis reveals inositol, not choline, as the major effector of Ino2p-Ino4p and unfolded protein response target gene expression in yeast.

Authors:  Stephen A Jesch; Xin Zhao; Martin T Wells; Susan A Henry
Journal:  J Biol Chem       Date:  2004-12-20       Impact factor: 5.157

5.  IN02, a positive regulator of lipid biosynthesis, is essential for the formation of inducible membranes in yeast.

Authors:  Laura Block-Alper; Paul Webster; Xianghong Zhou; Lubica Supeková; Wing Hung Wong; Peter G Schultz; David I Meyer
Journal:  Mol Biol Cell       Date:  2002-01       Impact factor: 4.138

6.  SIN3 works through two different promoter elements to regulate INO1 gene expression in yeast.

Authors:  K H Slekar; S A Henry
Journal:  Nucleic Acids Res       Date:  1995-06-11       Impact factor: 16.971

Review 7.  Genetic regulation of phospholipid biosynthesis in Saccharomyces cerevisiae.

Authors:  M L Greenberg; J M Lopes
Journal:  Microbiol Rev       Date:  1996-03

8.  A computational genomics approach to the identification of gene networks.

Authors:  A Wagner
Journal:  Nucleic Acids Res       Date:  1997-09-15       Impact factor: 16.971

9.  Genomic analysis of PIS1 gene expression.

Authors:  Mary E Gardocki; Margaret Bakewell; Deepa Kamath; Kelly Robinson; Kathy Borovicka; John M Lopes
Journal:  Eukaryot Cell       Date:  2005-03

10.  INO1-100: an allele of the Saccharomyces cerevisiae INO1 gene that is transcribed without the action of the positive factors encoded by the INO2, INO4, SWI1, SWI2 and SWI3 genes.

Authors:  S Swift; P McGraw
Journal:  Nucleic Acids Res       Date:  1995-04-25       Impact factor: 16.971

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.