Literature DB >> 7829060

Use of an intron polymorphism to localize the tropoelastin gene to mouse chromosome 5 in a region of linkage conservation with human chromosome 7.

K S Wydner1, J L Sechler, C D Boyd, H C Passmore.   

Abstract

The complete coding sequence for mouse tropoelastin was obtained from overlapping reverse transcriptase polymerase chain reaction (PCR) amplimers. These cDNA fragments were derived from mouse tropoelastin mRNA using PCR oligomers complementary to conserved domains within rat tropoelastin mRNA. A comparison of coding domains of mouse and rat tropoelastin mRNA revealed a greater than 93% homology at the nucleotide level and over 96% similarity in the predicted amino acid sequence. PCR primers complementary to regions of the mouse tropoelastin mRNA were used to define a novel intron length polymorphism (ILP) within intron 8 of the mouse tropoelastin gene (Eln). This ILP proved to be informative in an interspecific backcross in which genomic DNA samples from 75 backcross mice were used to map the tropoelastin gene to a position in the distal half of mouse chromosome 5. The linkage and genetic distances between Eln and the closest molecular markers used in this study are centromere-D5Mit95, D5Mit96-6.7 cM-Gus, Eln-4.0 cM-Zp3-telomere.

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Year:  1994        PMID: 7829060     DOI: 10.1006/geno.1994.1467

Source DB:  PubMed          Journal:  Genomics        ISSN: 0888-7543            Impact factor:   5.736


  5 in total

1.  Generation and comparative analysis of approximately 3.3 Mb of mouse genomic sequence orthologous to the region of human chromosome 7q11.23 implicated in Williams syndrome.

Authors:  Udaya DeSilva; Laura Elnitski; Jacquelyn R Idol; Johannah L Doyle; Weiniu Gan; James W Thomas; Scott Schwartz; Nicole L Dietrich; Stephen M Beckstrom-Sternberg; Jennifer C McDowell; Robert W Blakesley; Gerard G Bouffard; Pamela J Thomas; Jeffrey W Touchman; Webb Miller; Eric D Green
Journal:  Genome Res       Date:  2002-01       Impact factor: 9.043

2.  Genome-wide discovery of DNA polymorphism in Brassica rapa.

Authors:  Soomin Park; Hee-Ju Yu; Jeong-Hwan Mun; Seung-Chan Lee
Journal:  Mol Genet Genomics       Date:  2009-12-19       Impact factor: 3.291

3.  Comparative mapping of the region of human chromosome 7 deleted in williams syndrome.

Authors:  U DeSilva; H Massa; B J Trask; E D Green
Journal:  Genome Res       Date:  1999-05       Impact factor: 9.043

4.  Miniature Inverted Repeat Transposable Element Insertions Provide a Source of Intron Length Polymorphism Markers in the Carrot (Daucus carota L.).

Authors:  Katarzyna Stelmach; Alicja Macko-Podgórni; Gabriela Machaj; Dariusz Grzebelus
Journal:  Front Plant Sci       Date:  2017-05-09       Impact factor: 5.753

5.  Multi-species sequence comparison reveals dynamic evolution of the elastin gene that has involved purifying selection and lineage-specific insertions/deletions.

Authors:  Helen Piontkivska; Yi Zhang; Eric D Green; Laura Elnitski
Journal:  BMC Genomics       Date:  2004-05-18       Impact factor: 3.969

  5 in total

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