Effect of the RelA gene on the synthesis of individual proteins in vivo.

We have shown that the relA gene can affect the rates of synthesis of many nonribosomal proteins in E. coli. We used rel+ and relA strains that contain a temperature-sensitive valyl tRNA synthetase. Upon transfer from a permissive temperature (30degreesC) to a semi-resitrictive one (36.5degreesC), these strains continue to grow, although undergoing a partial deprivation of valyl tRNA, In the rel+ strain, the concentration of ppGpp increases immediately, and the accumulation of RNA ceases abruptly but temporarily. In contrast, in the relA strain, the concentration of ppGpp falls, whereas the rate of accumulation of RNA increases. As judged by gel electrophoresis, the rates at which individual polypeptides are synthesized by the strains after their transfer to 36.5degreesC depend to a large extent upon the allelic state of the relA gene. In both strains, the concentration of ppGpp changes soon enough to have altered the synthesis of some of the proteins by affecting the transcription of their genes.