Literature DB >> 7827072

Evidence for sub-picosecond heme doming in hemoglobin and myoglobin: a time-resolved resonance Raman comparison of carbonmonoxy and deoxy species.

S Franzen1, B Bohn, C Poyart, J L Martin.   

Abstract

Separation of the photophysical aspects of the sub-picosecond (sub-ps) time-resolved resonance Raman signal from contributions due to conformation has been achieved by comparing deoxyhemoglobin (Hb) in the T state with (carbonmonoxy)hemoglobin (HbCO), deoxy-beta 4 (beta 4 CO) (All R state), and monomers deoxymyoglobin and (carbonmonoxy)myoglobin (MbCO) [beta 4 consists of a tetramer of four beta-subunits and shows no cooperativity]. In all photolyzed species, Hb*(CO), Mb*(CO), and beta 4*(CO), the iron-histidine out-of-plane mode (vFe-His), indicative of heme doming, achieves 90% of its full intensity in 1 ps. The frequency of this mode (223-228 cm-1) is shifted significantly relative to equilibrium deoxy-Hb (210-216 cm-1) in the T state, but not with respect to either equilibrium deoxy-Mb or deoxy-beta 4. A correlation between the +12 cm-1 bandshift of vFe-His and the -2 cm-1 shift of the electron density marker band (v4 at 1370 cm-1) relative to T-state deoxy-Hb is shown to hold on all time scales, including the sub-picosecond time scale. Photolyzed Hb*(CO) consists of R-state or weakly interacting tetramers on the picosecond time scale and is shown to have properties similar to those of photolyzed Mb*(CO) and beta 4*(CO) on the picosecond time scale. These results establish that heme doming occurs as an ultrafast reaction to ligand dissociation and that heme doming is the primary event in the sequence of conformational changes leading to the cooperative R-->T transition.

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Year:  1995        PMID: 7827072     DOI: 10.1021/bi00004a016

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  23 in total

1.  Doming modes and dynamics of model heme compounds.

Authors:  Dennis D Klug; Marek Z Zgierski; John S Tse; Zhenxian Liu; James R Kincaid; Kazimierz Czarnecki; Russell J Hemley
Journal:  Proc Natl Acad Sci U S A       Date:  2002-09-18       Impact factor: 11.205

2.  Resonance Raman Structural Evidence that the Cis-to-Trans Isomerization in Rhodopsin Occurs in Femtoseconds.

Authors:  J E Kim; D W McCamant; L Zhu; R A Mathies
Journal:  J Phys Chem B       Date:  2001-02-15       Impact factor: 2.991

3.  Temperature-dependent studies of NO recombination to heme and heme proteins.

Authors:  Dan Ionascu; Flaviu Gruia; Xiong Ye; Anchi Yu; Florin Rosca; Chris Beck; Andrey Demidov; John S Olson; Paul M Champion
Journal:  J Am Chem Soc       Date:  2005-12-07       Impact factor: 15.419

4.  Heme photolysis occurs by ultrafast excited state metal-to-ring charge transfer.

Authors:  S Franzen; L Kiger; C Poyart; J L Martin
Journal:  Biophys J       Date:  2001-05       Impact factor: 4.033

5.  Temperature-dependent heme kinetics with nonexponential binding and barrier relaxation in the absence of protein conformational substates.

Authors:  Xiong Ye; Dan Ionascu; Florin Gruia; Anchi Yu; Abdelkrim Benabbas; Paul M Champion
Journal:  Proc Natl Acad Sci U S A       Date:  2007-09-05       Impact factor: 11.205

6.  Femtosecond time resolution in x-ray diffraction experiments.

Authors:  R Neutze; J Hajdu
Journal:  Proc Natl Acad Sci U S A       Date:  1997-05-27       Impact factor: 11.205

7.  Direct observation of subpicosecond vibrational dynamics in photoexcited myoglobin.

Authors:  C Ferrante; E Pontecorvo; G Cerullo; M H Vos; T Scopigno
Journal:  Nat Chem       Date:  2016-09-05       Impact factor: 24.427

8.  Spin-dependent mechanism for diatomic ligand binding to heme.

Authors:  Stefan Franzen
Journal:  Proc Natl Acad Sci U S A       Date:  2002-12-11       Impact factor: 11.205

9.  Ligand migration pathway and protein dynamics in myoglobin: a time-resolved crystallographic study on L29W MbCO.

Authors:  Marius Schmidt; Karin Nienhaus; Reinhard Pahl; Angela Krasselt; Spencer Anderson; Fritz Parak; G Ulrich Nienhaus; Vukica Srajer
Journal:  Proc Natl Acad Sci U S A       Date:  2005-08-05       Impact factor: 11.205

10.  Ultrafast anisotropic protein quake propagation after CO photodissociation in myoglobin.

Authors:  Levin U L Brinkmann; Jochen S Hub
Journal:  Proc Natl Acad Sci U S A       Date:  2016-09-06       Impact factor: 11.205

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