Literature DB >> 7816623

The yeast BDF1 gene encodes a transcription factor involved in the expression of a broad class of genes including snRNAs.

Z Lygerou1, C Conesa, P Lesage, R N Swanson, A Ruet, M Carlson, A Sentenac, B Séraphin.   

Abstract

While screening for genes that affect the synthesis of yeast snRNPs, we identified a thermosensitive mutant that abolishes the production of a reporter snRNA at the non-permissive temperature. This mutant defines a new gene, named BDF1. In a bdf1-1 strain, the reporter snRNA synthesized before the temperature shift remains stable at the non-permissive temperature. This demonstrates that the BDF1 gene affects the synthesis rather than the stability of the reporter snRNA and suggests that the BDF1 gene encodes a transcription factor. BDF1 is present in single copy on yeast chromosome XII, and is important for normal vegetative growth but not essential for cell viability. bdf1 null mutants share common phenotypes with several mutants affecting general transcription and are defective in snRNA production. BDF1 encodes a protein of 687 amino-acids containing two copies of the bromodomain, a motif also present in other transcription factors as well as a new conserved domain, the ET domain, also present in Drosophila and human proteins.

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Year:  1994        PMID: 7816623      PMCID: PMC332079          DOI: 10.1093/nar/22.24.5332

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  63 in total

Review 1.  Nuclear import-export: in search of signals and mechanisms.

Authors:  E A Nigg; P A Baeuerle; R Lührmann
Journal:  Cell       Date:  1991-07-12       Impact factor: 41.582

2.  The SNF2, SNF5 and SNF6 genes are required for Ty transcription in Saccharomyces cerevisiae.

Authors:  A M Happel; M S Swanson; F Winston
Journal:  Genetics       Date:  1991-05       Impact factor: 4.562

Review 3.  Messenger RNA splicing in yeast: clues to why the spliceosome is a ribonucleoprotein.

Authors:  C Guthrie
Journal:  Science       Date:  1991-07-12       Impact factor: 47.728

4.  The maternal-effect gene fsh is essential for the specification of the central region of the Drosophila embryo.

Authors:  D H Huang; I B Dawid
Journal:  New Biol       Date:  1990-02

5.  Isolation of TFC1, a gene encoding one of two DNA-binding subunits of yeast transcription factor tau (TFIIIC).

Authors:  R N Swanson; C Conesa; O Lefebvre; C Carles; A Ruet; E Quemeneur; J Gagnon; A Sentenac
Journal:  Proc Natl Acad Sci U S A       Date:  1991-06-01       Impact factor: 11.205

6.  The GAM1/SNF2 gene of Saccharomyces cerevisiae encodes a highly charged nuclear protein required for transcription of the STA1 gene.

Authors:  H Yoshimoto; I Yamashita
Journal:  Mol Gen Genet       Date:  1991-08

7.  Functional interdependence of the yeast SNF2, SNF5, and SNF6 proteins in transcriptional activation.

Authors:  B C Laurent; M A Treitel; M Carlson
Journal:  Proc Natl Acad Sci U S A       Date:  1991-04-01       Impact factor: 11.205

8.  brahma: a regulator of Drosophila homeotic genes structurally related to the yeast transcriptional activator SNF2/SWI2.

Authors:  J W Tamkun; R Deuring; M P Scott; M Kissinger; A M Pattatucci; T C Kaufman; J A Kennison
Journal:  Cell       Date:  1992-02-07       Impact factor: 41.582

9.  A split zinc-finger protein is required for normal yeast growth.

Authors:  H Blumberg; P Silver
Journal:  Gene       Date:  1991-10-30       Impact factor: 3.688

10.  Genetic depletion indicates a late role for U5 snRNP during in vitro spliceosome assembly.

Authors:  B Séraphin; N Abovich; M Rosbash
Journal:  Nucleic Acids Res       Date:  1991-07-25       Impact factor: 16.971

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  44 in total

1.  A bromodomain protein, MCAP, associates with mitotic chromosomes and affects G(2)-to-M transition.

Authors:  A Dey; J Ellenberg; A Farina; A E Coleman; T Maruyama; S Sciortino; J Lippincott-Schwartz; K Ozato
Journal:  Mol Cell Biol       Date:  2000-09       Impact factor: 4.272

Review 2.  BET domain co-regulators in obesity, inflammation and cancer.

Authors:  Anna C Belkina; Gerald V Denis
Journal:  Nat Rev Cancer       Date:  2012-06-22       Impact factor: 60.716

3.  Latent nuclear antigen of Kaposi's sarcoma-associated herpesvirus interacts with RING3, a homolog of the Drosophila female sterile homeotic (fsh) gene.

Authors:  G M Platt; G R Simpson; S Mittnacht; T F Schulz
Journal:  J Virol       Date:  1999-12       Impact factor: 5.103

4.  A role for U2/U6 helix Ib in 5' splice site selection.

Authors:  B G Luukkonen; B Séraphin
Journal:  RNA       Date:  1998-08       Impact factor: 4.942

5.  Genetic interaction between U6 snRNA and the first intron nucleotide in Saccharomyces cerevisiae.

Authors:  B G Luukkonen; B Séraphin
Journal:  RNA       Date:  1998-02       Impact factor: 4.942

6.  Construction of an in vivo-regulated U6 snRNA transcription unit as a tool to study U6 function.

Authors:  B G Luukkonen; B Séraphin
Journal:  RNA       Date:  1998-02       Impact factor: 4.942

7.  A possible involvement of TIF1 alpha and TIF1 beta in the epigenetic control of transcription by nuclear receptors.

Authors:  B Le Douarin; A L Nielsen; J M Garnier; H Ichinose; F Jeanmougin; R Losson; P Chambon
Journal:  EMBO J       Date:  1996-12-02       Impact factor: 11.598

8.  Phylogeny and structure of the RING3 gene.

Authors:  K L Thorpe; S Abdulla; J Kaufman; J Trowsdale; S Beck
Journal:  Immunogenetics       Date:  1996       Impact factor: 2.846

9.  Acetylation-dependent chromatin reorganization by BRDT, a testis-specific bromodomain-containing protein.

Authors:  Christophe Pivot-Pajot; Cécile Caron; Jérôme Govin; Alexandre Vion; Sophie Rousseaux; Saadi Khochbin
Journal:  Mol Cell Biol       Date:  2003-08       Impact factor: 4.272

10.  Bromodomain factor 1 (Bdf1) is phosphorylated by protein kinase CK2.

Authors:  Chika Sawa; Eduard Nedea; Nevan Krogan; Tadashi Wada; Hiroshi Handa; Jack Greenblatt; Stephen Buratowski
Journal:  Mol Cell Biol       Date:  2004-06       Impact factor: 4.272

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