Literature DB >> 7796819

Macromolecular recognition through electrostatic repulsion.

H Bedouelle1, R Nageotte.   

Abstract

In the process of genetic translation, each aminoacyl-tRNA synthetase specifically aminoacylates its cognate tRNAs and rejects the 19 other species of tRNAs. A decrease in the specificity of this reaction can result in misincorporations of amino acids into proteins and be deleterious to the cell. In the case of tyrosyl-tRNA synthetase from Bacillus stearothermophilus, the change of residue Glu152 into Ala results in erroneous interactions with non-cognate tRNAs. To analyse how Glu152 contributes to the discrimination between tRNAs by tyrosyl-tRNA synthetase, 11 changes to this residue were created by mutagenesis. The misaminoacylations of tRNA(Phe) and tRNA(Val) with tyrosine in vitro (on a scale going from 1 to 30) and the toxicity of tyrosyl-tRNA synthetase in vivo (on a scale from 1 to 10(7)) increased in a correlated way when the nature of the side chain in position 152 varied from negatively charged to uncharged then to positively charged. The aminoacylation of tRNA(Tyr) was unaffected by the mutations. The results show that the role of Glu152 in the discrimination between tRNAs is purely negative, that it acts by electrostatic repulsion of non-cognate tRNAs and that this mechanism has been conserved throughout evolution.

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Year:  1995        PMID: 7796819      PMCID: PMC398414          DOI: 10.1002/j.1460-2075.1995.tb07294.x

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  33 in total

1.  Compilation of tRNA sequences and sequences of tRNA genes.

Authors:  M Sprinzl; T Hartmann; J Weber; J Blank; R Zeidler
Journal:  Nucleic Acids Res       Date:  1989       Impact factor: 16.971

2.  Structural and kinetic bases for the recognition of tRNATyr by tyrosyl-tRNA synthetase.

Authors:  E Labouze; H Bedouelle
Journal:  J Mol Biol       Date:  1989-02-20       Impact factor: 5.469

3.  Dissection of the structure and activity of the tyrosyl-tRNA synthetase by site-directed mutagenesis.

Authors:  A R Fersht
Journal:  Biochemistry       Date:  1987-12-15       Impact factor: 3.162

4.  A model of synthetase/transfer RNA interaction as deduced by protein engineering.

Authors:  H Bedouelle; G Winter
Journal:  Nature       Date:  1986 Mar 27-Apr 2       Impact factor: 49.962

5.  Accuracy of in vivo aminoacylation requires proper balance of tRNA and aminoacyl-tRNA synthetase.

Authors:  R Swanson; P Hoben; M Sumner-Smith; H Uemura; L Watson; D Söll
Journal:  Science       Date:  1988-12-16       Impact factor: 47.728

6.  Rapid and efficient site-specific mutagenesis without phenotypic selection.

Authors:  T A Kunkel; J D Roberts; R A Zakour
Journal:  Methods Enzymol       Date:  1987       Impact factor: 1.600

7.  Codon catalog usage is a genome strategy modulated for gene expressivity.

Authors:  R Grantham; C Gautier; M Gouy; M Jacobzone; R Mercier
Journal:  Nucleic Acids Res       Date:  1981-01-10       Impact factor: 16.971

8.  Structure of E. coli glutaminyl-tRNA synthetase complexed with tRNA(Gln) and ATP at 2.8 A resolution.

Authors:  M A Rould; J J Perona; D Söll; T A Steitz
Journal:  Science       Date:  1989-12-01       Impact factor: 47.728

9.  Structure of tyrosyl-tRNA synthetase refined at 2.3 A resolution. Interaction of the enzyme with the tyrosyl adenylate intermediate.

Authors:  P Brick; T N Bhat; D M Blow
Journal:  J Mol Biol       Date:  1989-07-05       Impact factor: 5.469

10.  Quantities of individual aminoacyl-tRNA families and their turnover in Escherichia coli.

Authors:  H Jakubowski; E Goldman
Journal:  J Bacteriol       Date:  1984-06       Impact factor: 3.490

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  3 in total

1.  Solvation change and ion release during aminoacylation by aminoacyl-tRNA synthetases.

Authors:  Rajat Banerjee; Amit Kumar Mandal; Rajesh Saha; Soumi Guha; Soma Samaddar; Anusree Bhattacharyya; Siddhartha Roy
Journal:  Nucleic Acids Res       Date:  2003-10-15       Impact factor: 16.971

2.  Class I tyrosyl-tRNA synthetase has a class II mode of cognate tRNA recognition.

Authors:  Anna Yaremchuk; Ivan Kriklivyi; Michael Tukalo; Stephen Cusack
Journal:  EMBO J       Date:  2002-07-15       Impact factor: 11.598

3.  Transfer RNA-dependent cognate amino acid recognition by an aminoacyl-tRNA synthetase.

Authors:  K W Hong; M Ibba; I Weygand-Durasevic; M J Rogers; H U Thomann; D Söll
Journal:  EMBO J       Date:  1996-04-15       Impact factor: 11.598

  3 in total

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