Literature DB >> 7793948

Unraveling the extent of diversity within the order Planctomycetales.

N Ward1, F A Rainey, E Stackebrandt, H Schlesner.   

Abstract

The phylogenetic positions of 22 isolates that morphologically resemble members of the family Planctomycetaceae were determined by sequence analysis of genes coding for 16S rRNA. While nine and eight isolates could be assigned to the genera Planctomyces and Pirellula, respectively, three strains grouped near Isosphaera pallida and one strain was closely related to Gemmata obscuriglobus. No isolate was found to be related to a previously described species of any of the four genera at the species level. Morphological characters and sequence idiosyncrasies of genes coding for 16S rRNA of the isolates generally correlated with features described for the four genera to which the isolates could be assigned. One strain stands phylogenetically isolated and may be representative of a novel genus of the family. Comparison with environmental clone sequences representing planctomycetes in soil and water revealed that three of the novel isolates were related to one clone of soil origin, but no close relationships between clones and the other new strains were found. The study reveals that the biodiversity of planctomycetes is significantly greater than was previously determined.

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Year:  1995        PMID: 7793948      PMCID: PMC167499          DOI: 10.1128/aem.61.6.2270-2275.1995

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  17 in total

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Authors:  D Bomar; S Giovannoni; E Stackebrandt
Journal:  J Mol Evol       Date:  1988       Impact factor: 2.395

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Journal:  Nature       Date:  1984 Feb 23-29       Impact factor: 49.962

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Journal:  Appl Environ Microbiol       Date:  1991-11       Impact factor: 4.792

10.  Gemmata obscuriglobus, a new genus and species of the budding bacteria.

Authors:  P D Franzmann; V B Skerman
Journal:  Antonie Van Leeuwenhoek       Date:  1984       Impact factor: 2.271

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  22 in total

1.  Molecular evidence for novel planctomycete diversity in a municipal wastewater treatment plant.

Authors:  Rakia Chouari; Denis Le Paslier; Patrick Daegelen; Philippe Ginestet; Jean Weissenbach; Abdelghani Sghir
Journal:  Appl Environ Microbiol       Date:  2003-12       Impact factor: 4.792

2.  Microbial scout hypothesis and microbial discovery.

Authors:  S Buerger; A Spoering; E Gavrish; C Leslin; L Ling; S S Epstein
Journal:  Appl Environ Microbiol       Date:  2012-02-24       Impact factor: 4.792

3.  Potential of a 16S rRNA-based taxonomic microarray for analyzing the rhizosphere effects of maize on Agrobacterium spp. and bacterial communities.

Authors:  Hervé Sanguin; Benoît Remenant; Arnaud Dechesne; Jean Thioulouse; Timothy M Vogel; Xavier Nesme; Yvan Moënne-Loccoz; Geneviève L Grundmann
Journal:  Appl Environ Microbiol       Date:  2006-06       Impact factor: 4.792

4.  Phylogenetic analysis and in situ identification of bacteria community composition in an acidic Sphagnum peat bog.

Authors:  Svetlana N Dedysh; Timofei A Pankratov; Svetlana E Belova; Irina S Kulichevskaya; Werner Liesack
Journal:  Appl Environ Microbiol       Date:  2006-03       Impact factor: 4.792

5.  Diversity of bacterial community in freshwater of Woopo wetland.

Authors:  Keun Sik Baik; Seong Chan Park; Eun Mi Kim; Kyung Sook Bae; Jae-Hyung Ahn; Jong-Ok Ka; Jongsik Chun; Chi Nam Seong
Journal:  J Microbiol       Date:  2008-12-24       Impact factor: 3.422

6.  Formation of multilayered photosynthetic biofilms in an alkaline thermal spring in Yellowstone National Park, Wyoming.

Authors:  Sarah M Boomer; Katherine L Noll; Gill G Geesey; Bryan E Dutton
Journal:  Appl Environ Microbiol       Date:  2009-02-13       Impact factor: 4.792

7.  Description of freshwater bacterial assemblages from the upper paraná river floodpulse system, Brazil.

Authors:  Michael J Lemke; E Kurt Lienau; Jean Rothe; Thomaz A Pagioro; Jeff Rosenfeld; Rob Desalle
Journal:  Microb Ecol       Date:  2008-06-28       Impact factor: 4.552

8.  Specific detection, isolation, and characterization of selected, previously uncultured members of the freshwater bacterioplankton community.

Authors:  Frederic Gich; Karin Schubert; Alke Bruns; Herbert Hoffelner; Jörg Overmann
Journal:  Appl Environ Microbiol       Date:  2005-10       Impact factor: 4.792

9.  Screening of a fosmid library of marine environmental genomic DNA fragments reveals four clones related to members of the order Planctomycetales.

Authors:  K L Vergin; E Urbach; J L Stein; E F DeLong; B D Lanoil; S J Giovannoni
Journal:  Appl Environ Microbiol       Date:  1998-08       Impact factor: 4.792

10.  Bacterial diversity in Adirondack mountain lakes as revealed by 16S rRNA gene sequences.

Authors:  W D Hiorns; B A Methé; S A Nierzwicki-Bauer; J P Zehr
Journal:  Appl Environ Microbiol       Date:  1997-07       Impact factor: 4.792

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