Literature DB >> 7789967

POM-ZP3, a bipartite transcript derived from human ZP3 and a POM121 homologue.

S Kipersztok1, G A Osawa, L F Liang, W S Modi, J Dean.   

Abstract

Human POM-ZP3 is a novel bipartite RNA transcript that is derived from a gene homologous to rat POM121 (a nuclear pore membrane protein) and ZP3 (a sperm receptor ligand in the zona pellucida). The 5' region is 77% identical to the 5' end of the coding region of rat POM121 and appears to represent a partial duplication of a gene encoding a human homologue of this rodent gene. The 3' end of the POM-ZP3 transcript is 99% identical to ZP3 and appears to have arisen from a duplication of the last four exons (exons 5-8) of ZP3. Using Northern blots and RT-PCR, POM-ZP3 transcripts were detected in human ovaries, testes, spleen, thymus, lymphocytes, prostate, and intestines. The longest open reading frame encodes a conceptual protein of 210 amino acids, the first 76 of which are 83% identical to residues 241-315 of rat POM121. The next 125 amino acids are 98% identical to residues 239-363 of the 424-amino-acid human ZP3 protein. By fluorescence in situ hybridization, genomic fragments of ZP3 and a human homologue of POM121 were localized to chromosome 7q11.23. Taken together, these data suggest that partial duplications of human ZP3 and a POM121-like gene have resulted in a fusion transcript, POM-ZP3, that is expressed in multiple human tissues.

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Year:  1995        PMID: 7789967     DOI: 10.1016/0888-7543(95)80033-i

Source DB:  PubMed          Journal:  Genomics        ISSN: 0888-7543            Impact factor:   5.736


  8 in total

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Review 5.  Fusion genes and their discovery using high throughput sequencing.

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Authors:  Marc Ferré; Patrizia Amati-Bonneau; Catherine Morinière; Véronique Ferré-L'Hôtellier; Sophie Lemerle; Daniel Przyrowski; Vincent Procaccio; Philippe Descamps; Pascal Reynier; Pascale May-Panloup
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Journal:  Genes Dev       Date:  2016-05-19       Impact factor: 11.361

  8 in total

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