Literature DB >> 7787047

Design and performance of an ultraviolet resonance Raman spectrometer for proteins and nucleic acids.

M P Russell1, S Vohník, G J Thomas.   

Abstract

We describe an ultraviolet resonance Raman (UVRR) spectrometer appropriate for structural studies of biological macromolecules and their assemblies. Instrument design includes the following features: a continuous wave, intracavity doubled, ultraviolet laser source for excitation of the Raman spectrum; a rotating cell (or jet source) for presentation of the sample to the laser beam; a Cassegrain optic with f/1.0 aperture for collection of the Raman scattering; a quartz prism dispersing element for rejection of stray light and Rayleigh scattering; a 0.75-m single grating monochromator for dispersion of the Raman scattering; and a liquid-nitrogen-cooled, charge-coupled device for detection of the Raman photons. The performance of this instrument, assessed on the basis of the observed signal-to-noise ratios, the apparent resolution of closely spaced spectral bands, and the wide spectrometer bandpass of 2200 cm-1, is believed superior to previously described UVRR spectrometers of similar design. Performance characteristics of the instrument are demonstrated in UVRR spectra obtained from standard solvents, p-ethylphenol, which serves as a model for the tyrosine side chain, the DNA nucleotide deoxyguanosine-5'-monophosphate, and the human tumor necrosis factor binding protein, which is considered representative of soluble globular proteins.

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Year:  1995        PMID: 7787047      PMCID: PMC1282056          DOI: 10.1016/S0006-3495(95)80334-6

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  6 in total

1.  Interpretation of the doublet at 850 and 830 cm-1 in the Raman spectra of tyrosyl residues in proteins and certain model compounds.

Authors:  M N Siamwiza; R C Lord; M C Chen; T Takamatsu; I Harada; H Matsuura; T Shimanouchi
Journal:  Biochemistry       Date:  1975-11-04       Impact factor: 3.162

2.  Kinetics of hydrogen-deuterium exchange in guanosine 5'-monophosphate and guanosine 3':5'-monophosphate determined by laser-Raman spectroscopy.

Authors:  M J Lane; G J Thomas
Journal:  Biochemistry       Date:  1979-09-04       Impact factor: 3.162

3.  Tyrosine hydrogen-bonding and environmental effects in proteins probed by ultraviolet resonance Raman spectroscopy.

Authors:  P G Hildebrandt; R A Copeland; T G Spiro; J Otlewski; M Laskowski; F G Prendergast
Journal:  Biochemistry       Date:  1988-07-26       Impact factor: 3.162

4.  Hydrogen exchange dynamics of the P22 virion determined by time-resolved Raman spectroscopy. Effects of chromosome packaging on the kinetics of nucleotide exchanges.

Authors:  K E Reilly; G J Thomas
Journal:  J Mol Biol       Date:  1994-08-05       Impact factor: 5.469

5.  Novel tyrosine markers in Raman spectra of wild-type and mutant (Y21M and Y24M) Ff virions indicate unusual environments for coat protein phenoxyls.

Authors:  S A Overman; K L Aubrey; N S Vispo; G Cesareni; G J Thomas
Journal:  Biochemistry       Date:  1994-02-08       Impact factor: 3.162

6.  Cysteine conformation and sulfhydryl interactions in proteins and viruses. 3. Quantitative measurement of the Raman S-H band intensity and frequency.

Authors:  R Tuma; S Vohník; H Li; G J Thomas
Journal:  Biophys J       Date:  1993-09       Impact factor: 4.033

  6 in total
  6 in total

1.  Secondary structure polymorphism in Oxytricha nova telomeric DNA.

Authors:  Christoph Krafft; James M Benevides; George J Thomas
Journal:  Nucleic Acids Res       Date:  2002-09-15       Impact factor: 16.971

2.  Structure and dynamics of the DNA-binding protein HU of B. stearothermophilus investigated by Raman and ultraviolet-resonance Raman spectroscopy.

Authors:  Doinita Serban; Sandra F Arcineigas; Constantinos E Vorgias; George J Thomas
Journal:  Protein Sci       Date:  2003-04       Impact factor: 6.725

3.  Insights into Protein Structure and Dynamics by Ultraviolet and Visible Resonance Raman Spectroscopy.

Authors:  Ignacio López-Peña; Brian S Leigh; Diana E Schlamadinger; Judy E Kim
Journal:  Biochemistry       Date:  2015-07-29       Impact factor: 3.162

4.  Hydrogen bonding and solvent polarity markers in the uv resonance raman spectrum of tryptophan: application to membrane proteins.

Authors:  Diana E Schlamadinger; Jonathan E Gable; Judy E Kim
Journal:  J Phys Chem B       Date:  2009-11-05       Impact factor: 2.991

5.  Deep UV resonant Raman spectroscopy for photodamage characterization in cells.

Authors:  Yasuaki Kumamoto; Atsushi Taguchi; Nicholas Isaac Smith; Satoshi Kawata
Journal:  Biomed Opt Express       Date:  2011-03-18       Impact factor: 3.732

6.  Accurate yet feasible computations of resonance Raman spectra for metal complexes in solution: [Ru(bpy)3](2+) as a case study.

Authors:  Alberto Baiardi; Camille Latouche; Julien Bloino; Vincenzo Barone
Journal:  Dalton Trans       Date:  2014-12-21       Impact factor: 4.390

  6 in total

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