Literature DB >> 7782072

A physical map of chromosome 20 established using fluorescence in situ hybridization and digital image analysis.

T Stokke1, C Collins, W L Kuo, D Kowbel, F Shadravan, M Tanner, A Kallioniemi, O P Kallioniemi, D Pinkel, L Deaven.   

Abstract

The physical locations of 46 cosmid clones and 21 P1 clones were determined along the chromosome 20 axis relative to the p terminus (FLpter) using fluorescence in situ hybridization (FISH) and digital image microscopy. The cosmid clones were selected from the chromosomally enriched library LA20NC01. Nine P1 clones were selected from a pooled DuPont genomic library using PCR with primer pairs selected to amplify genetically mapped sequence-tagged sites. This information was used to relate the physical map to the genetic map. Twelve P1 clones were selected from the same library using PCR primer pairs that amplified known genes. Two of these, E2F and BCLX, had not been mapped previously.

Mesh:

Year:  1995        PMID: 7782072     DOI: 10.1016/0888-7543(95)80092-z

Source DB:  PubMed          Journal:  Genomics        ISSN: 0888-7543            Impact factor:   5.736


  13 in total

1.  Adeno-associated virus Rep proteins target DNA sequences to a unique locus in the human genome.

Authors:  R T Surosky; M Urabe; S G Godwin; S A McQuiston; G J Kurtzman; K Ozawa; G Natsoulis
Journal:  J Virol       Date:  1997-10       Impact factor: 5.103

2.  Molecular cloning of the human leukotriene C4 synthase gene and assignment to chromosome 5q35.

Authors:  T D Bigby; C R Hodulik; K C Arden; L Fu
Journal:  Mol Med       Date:  1996-09       Impact factor: 6.354

3.  Conserved structure and adjacent location of the thrombin receptor and protease-activated receptor 2 genes define a protease-activated receptor gene cluster.

Authors:  M Kahn; K Ishii; W L Kuo; M Piper; A Connolly; Y P Shi; R Wu; C C Lin; S R Coughlin
Journal:  Mol Med       Date:  1996-05       Impact factor: 6.354

4.  A macrophage receptor for apolipoprotein B48: cloning, expression, and atherosclerosis.

Authors:  M L Brown; M P Ramprasad; P K Umeda; A Tanaka; Y Kobayashi; T Watanabe; H Shimoyamada; W L Kuo; R Li; R Song; W A Bradley; S H Gianturco
Journal:  Proc Natl Acad Sci U S A       Date:  2000-06-20       Impact factor: 11.205

5.  Gain of chromosome 20 is a frequent aberration in liver metastasis of colorectal cancers.

Authors:  A Nanashima; H Yamaguchi; T Yasutake; T Sawai; H Kusano; Y Tagawa; T Nakagoe; H Ayabe
Journal:  Dig Dis Sci       Date:  1997-07       Impact factor: 3.199

6.  Comprehensive genome sequence analysis of a breast cancer amplicon.

Authors:  C Collins; S Volik; D Kowbel; D Ginzinger; B Ylstra; T Cloutier; T Hawkins; P Predki; C Martin; M Wernick; W L Kuo; A Alberts; J W Gray
Journal:  Genome Res       Date:  2001-06       Impact factor: 9.043

7.  Molecular characterization and chromosomal localization of a third alpha-class hypoxia inducible factor subunit, HIF3alpha.

Authors:  Y Z Gu; S M Moran; J B Hogenesch; L Wartman; C A Bradfield
Journal:  Gene Expr       Date:  1998

8.  Zf9, a Kruppel-like transcription factor up-regulated in vivo during early hepatic fibrosis.

Authors:  V Ratziu; A Lalazar; L Wong; Q Dang; C Collins; E Shaulian; S Jensen; S L Friedman
Journal:  Proc Natl Acad Sci U S A       Date:  1998-08-04       Impact factor: 11.205

9.  Identification of a gene encoding an acyl CoA:diacylglycerol acyltransferase, a key enzyme in triacylglycerol synthesis.

Authors:  S Cases; S J Smith; Y W Zheng; H M Myers; S R Lear; E Sande; S Novak; C Collins; C B Welch; A J Lusis; S K Erickson; R V Farese
Journal:  Proc Natl Acad Sci U S A       Date:  1998-10-27       Impact factor: 11.205

10.  Positional cloning of ZNF217 and NABC1: genes amplified at 20q13.2 and overexpressed in breast carcinoma.

Authors:  C Collins; J M Rommens; D Kowbel; T Godfrey; M Tanner; S I Hwang; D Polikoff; G Nonet; J Cochran; K Myambo; K E Jay; J Froula; T Cloutier; W L Kuo; P Yaswen; S Dairkee; J Giovanola; G B Hutchinson; J Isola; O P Kallioniemi; M Palazzolo; C Martin; C Ericsson; D Pinkel; D Albertson; W B Li; J W Gray
Journal:  Proc Natl Acad Sci U S A       Date:  1998-07-21       Impact factor: 11.205

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