Literature DB >> 7774579

Energy-dependent chromatin accessibility and nucleosome mobility in a cell-free system.

P D Varga-Weisz1, T A Blank, P B Becker.   

Abstract

Chromatin structure must be flexible to allow the binding of regulatory proteins and to accommodate different levels of gene activity. Chromatin assembled in a cell-free system derived from Drosophila embryos contains an activity that hydrolyses ATP to render entire nucleosome arrays mobile. Nucleosome movements, most likely their sliding, occurred even in the presence of the linker histone H1. The dynamic state of chromatin in the presence of the activity and ATP globally increased the accessibility of nucleosomal DNA to incoming proteins. This unprecedented demonstration of energy-dependent nucleosome mobility identifies a new principle which is likely to be fundamental to the mechanism of chromatin remodelling and the binding of regulatory proteins.

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Year:  1995        PMID: 7774579      PMCID: PMC398327          DOI: 10.1002/j.1460-2075.1995.tb07215.x

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  35 in total

1.  Mobility of positioned nucleosomes on 5 S rDNA.

Authors:  S Pennings; G Meersseman; E M Bradbury
Journal:  J Mol Biol       Date:  1991-07-05       Impact factor: 5.469

2.  Facilitated binding of GAL4 and heat shock factor to nucleosomal templates: differential function of DNA-binding domains.

Authors:  I C Taylor; J L Workman; T J Schuetz; R E Kingston
Journal:  Genes Dev       Date:  1991-07       Impact factor: 11.361

3.  Mobility of histones on the chromosome of simian virus 40.

Authors:  P Beard
Journal:  Cell       Date:  1978-11       Impact factor: 41.582

4.  Molecular cloning and expression of a hexameric Drosophila heat shock factor subject to negative regulation.

Authors:  J Clos; J T Westwood; P B Becker; S Wilson; K Lambert; C Wu
Journal:  Cell       Date:  1990-11-30       Impact factor: 41.582

5.  Characterization of the yeast SWI1, SWI2, and SWI3 genes, which encode a global activator of transcription.

Authors:  C L Peterson; I Herskowitz
Journal:  Cell       Date:  1992-02-07       Impact factor: 41.582

6.  brahma: a regulator of Drosophila homeotic genes structurally related to the yeast transcriptional activator SNF2/SWI2.

Authors:  J W Tamkun; R Deuring; M P Scott; M Kissinger; A M Pattatucci; T C Kaufman; J A Kennison
Journal:  Cell       Date:  1992-02-07       Impact factor: 41.582

7.  Transcription factor loading on the MMTV promoter: a bimodal mechanism for promoter activation.

Authors:  T K Archer; P Lefebvre; R G Wolford; G L Hager
Journal:  Science       Date:  1992-03-20       Impact factor: 47.728

8.  Reassociation of histone H1 with nucleosomes.

Authors:  P P Nelson; S C Albright; J M Wiseman; W T Garrard
Journal:  J Biol Chem       Date:  1979-11-25       Impact factor: 5.157

9.  Glucocorticoids are required for establishment and maintenance of an alteration in chromatin structure: induction leads to a reversible disruption of nucleosomes over an enhancer.

Authors:  A Reik; G Schütz; A F Stewart
Journal:  EMBO J       Date:  1991-09       Impact factor: 11.598

10.  Chromatin remodeling by GAGA factor and heat shock factor at the hypersensitive Drosophila hsp26 promoter in vitro.

Authors:  G Wall; P D Varga-Weisz; R Sandaltzopoulos; P B Becker
Journal:  EMBO J       Date:  1995-04-18       Impact factor: 11.598

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  53 in total

1.  DNA replication in quiescent cell nuclei: regulation by the nuclear envelope and chromatin structure.

Authors:  Z H Lu; H Xu; G H Leno
Journal:  Mol Biol Cell       Date:  1999-12       Impact factor: 4.138

2.  Periodical distribution of transcription factor sites in promoter regions and connection with chromatin structure.

Authors:  I Ioshikhes; E N Trifonov; M Q Zhang
Journal:  Proc Natl Acad Sci U S A       Date:  1999-03-16       Impact factor: 11.205

3.  p300-mediated acetylation facilitates the transfer of histone H2A-H2B dimers from nucleosomes to a histone chaperone.

Authors:  T Ito; T Ikehara; T Nakagawa; W L Kraus; M Muramatsu
Journal:  Genes Dev       Date:  2000-08-01       Impact factor: 11.361

4.  Acf1, the largest subunit of CHRAC, regulates ISWI-induced nucleosome remodelling.

Authors:  A Eberharter; S Ferrari; G Längst; T Straub; A Imhof; P Varga-Weisz; M Wilm; P B Becker
Journal:  EMBO J       Date:  2001-07-16       Impact factor: 11.598

5.  Chromatin disruption and histone acetylation in regulation of the human immunodeficiency virus type 1 long terminal repeat by thyroid hormone receptor.

Authors:  Shao-Chung Victor Hsia; Yun-Bo Shi
Journal:  Mol Cell Biol       Date:  2002-06       Impact factor: 4.272

6.  Hepatocyte nuclear factor 1alpha gene inactivation impairs chromatin remodeling and demethylation of the phenylalanine hydroxylase gene.

Authors:  M Pontoglio; D M Faust; A Doyen; M Yaniv; M C Weiss
Journal:  Mol Cell Biol       Date:  1997-09       Impact factor: 4.272

7.  The connection between chromatin motion on the 100 nm length scale and core histone dynamics in live XTC-2 cells and isolated nuclei.

Authors:  Sara K Davis; Christopher J Bardeen
Journal:  Biophys J       Date:  2004-01       Impact factor: 4.033

Review 8.  Nucleosome sliding: facts and fiction.

Authors:  Peter B Becker
Journal:  EMBO J       Date:  2002-09-16       Impact factor: 11.598

9.  Chromatin assembly in a yeast whole-cell extract.

Authors:  M C Schultz; D J Hockman; T A Harkness; W I Garinther; B A Altheim
Journal:  Proc Natl Acad Sci U S A       Date:  1997-08-19       Impact factor: 11.205

10.  NF-E2 disrupts chromatin structure at human beta-globin locus control region hypersensitive site 2 in vitro.

Authors:  J A Armstrong; B M Emerson
Journal:  Mol Cell Biol       Date:  1996-10       Impact factor: 4.272

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