Literature DB >> 7773790

A novel variant of the catalytic triad in the Streptomyces scabies esterase.

Y Wei1, J L Schottel, U Derewenda, L Swenson, S Patkar, Z S Derewenda.   

Abstract

The crystal structure of a novel esterase from Streptomyces scabies, a causal agent of the potato scab disease, was solved at 2.1 A resolution. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases. The active site contains a dyad of Ser 14 and His 283, closely resembling two of the three components of typical Ser-His-Asp(Glu) triads from other serine hydrolases. Proper orientation of the active site imidazol is maintained by a hydrogen bond between the N delta-H group and a main chain oxygen. Thus, the enzyme constitutes the first known natural variation of the chymotrypsin-like triad in which a carboxylic acid is replaced by a neutral hydrogen-bond acceptor.

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Year:  1995        PMID: 7773790     DOI: 10.1038/nsb0395-218

Source DB:  PubMed          Journal:  Nat Struct Biol        ISSN: 1072-8368


  37 in total

1.  Bacterial lipolytic enzymes: classification and properties.

Authors:  J L Arpigny; K E Jaeger
Journal:  Biochem J       Date:  1999-10-01       Impact factor: 3.857

2.  Harvesting the high-hanging fruit: the structure of the YdeN gene product from Bacillus subtilis at 1.8 angstroms resolution.

Authors:  Izabela Janda; Yancho Devedjiev; David Cooper; Maksymilian Chruszcz; Urszula Derewenda; Aleksandra Gabrys; Wladek Minor; Andrzej Joachimiak; Zygmunt S Derewenda
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2004-05-21

3.  AraPerox. A database of putative Arabidopsis proteins from plant peroxisomes.

Authors:  Sigrun Reumann; Changle Ma; Steffen Lemke; Lavanya Babujee
Journal:  Plant Physiol       Date:  2004-08-27       Impact factor: 8.340

4.  Crystallization and preliminary X-ray diffraction studies of a complex of extracellular lipase from Streptomyces rimosus with the inhibitor 3,4-dichloroisocoumarin.

Authors:  Ivana Leščić Ašler; Jasenka Pigac; Dušica Vujaklija; Marija Luić; Zoran Štefanić
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2011-10-27

5.  Structural and biochemical characterization of the salicylyl-acyltranferase SsfX3 from a tetracycline biosynthetic pathway.

Authors:  Lauren B Pickens; Michael R Sawaya; Huma Rasool; Inna Pashkov; Todd O Yeates; Yi Tang
Journal:  J Biol Chem       Date:  2011-09-29       Impact factor: 5.157

6.  Structural basis for intramembrane proteolysis by rhomboid serine proteases.

Authors:  Adam Ben-Shem; Deborah Fass; Eitan Bibi
Journal:  Proc Natl Acad Sci U S A       Date:  2006-12-26       Impact factor: 11.205

7.  Crystal structure of cutinase covalently inhibited by a triglyceride analogue.

Authors:  S Longhi; M Mannesse; H M Verheij; G H De Haas; M Egmond; E Knoops-Mouthuy; C Cambillau
Journal:  Protein Sci       Date:  1997-02       Impact factor: 6.725

8.  TESS: a geometric hashing algorithm for deriving 3D coordinate templates for searching structural databases. Application to enzyme active sites.

Authors:  A C Wallace; N Borkakoti; J M Thornton
Journal:  Protein Sci       Date:  1997-11       Impact factor: 6.725

9.  Molecular analysis of a gene encoding a cell-bound esterase from Streptomyces chrysomallus.

Authors:  R Berger; M Hoffmann; U Keller
Journal:  J Bacteriol       Date:  1998-12       Impact factor: 3.490

10.  Mycoplasma hyopneumoniae p65 surface lipoprotein is a lipolytic enzyme with a preference for shorter-chain fatty acids.

Authors:  Jono A Schmidt; Glenn F Browning; Philip F Markham
Journal:  J Bacteriol       Date:  2004-09       Impact factor: 3.490

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