Literature DB >> 7768442

Regulatory autonomy and molecular characterization of the Drosophila out at first gene.

D E Bergstrom1, C A Merli, J A Cygan, R Shelby, R K Blackman.   

Abstract

Our previous work has shown that the expression of the Drosophila decapentaplegic (dpp) gene in imaginal disks is controlled by a 30 kb array of enhancers located 3' of the dpp coding region. Here, we describe the cloning and characterization of out at first (oaf), a gene located near this enhancer region. Transcription of oaf results in three classes of alternatively polyadenylated RNAs whose expression is developmentally regulated. All oaf transcripts contain two adjacent open reading frames separated by a single UGA stop codon. Suppression of the UGA codon during translation, as seen previously in Drosophila, could lead to the production of different proteins from the same RNA. During oogenesis, oaf RNA is expressed in nurse cells of all ages and maternally contributed to the egg. During embryonic development, zygotic transcription of the gene occurs in small clusters of cells in most or all segments at the time of germband extension and subsequently in a segmentally repeated pattern in the developing central nervous system. The gene is also expressed in the embryonic, larval and adult gonads of both sexes. We also characterize an enhancer trap line with its transposon inserted within the oaf gene and use it to generate six recessive oaf mutations. All six cause death near the beginning of the first larval instar, with two characterized lines showing nervous system defects. Last, we discuss our data in light of the observation that the enhancers controlling dpp expression in the imaginal disks have no effect on the relatively nearby oaf gene.

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Year:  1995        PMID: 7768442      PMCID: PMC1206460     

Source DB:  PubMed          Journal:  Genetics        ISSN: 0016-6731            Impact factor:   4.562


  48 in total

1.  A stable genomic source of P element transposase in Drosophila melanogaster.

Authors:  H M Robertson; C R Preston; R W Phillis; D M Johnson-Schlitz; W K Benz; W R Engels
Journal:  Genetics       Date:  1988-03       Impact factor: 4.562

2.  Type I repressors of P element mobility.

Authors:  G B Gloor; C R Preston; D M Johnson-Schlitz; N A Nassif; R W Phillis; W K Benz; H M Robertson; W R Engels
Journal:  Genetics       Date:  1993-09       Impact factor: 4.562

Review 3.  The TGF-beta superfamily: new members, new receptors, and new genetic tests of function in different organisms.

Authors:  D M Kingsley
Journal:  Genes Dev       Date:  1994-01       Impact factor: 11.361

4.  Genetic and phenotypic analysis of thirteen essential genes in cytological interval 22F1-2; 23B1-2 reveals novel genes required for neural development in Drosophila.

Authors:  J T Littleton; H J Bellen
Journal:  Genetics       Date:  1994-09       Impact factor: 4.562

5.  Genomic sequencing.

Authors:  G M Church; W Gilbert
Journal:  Proc Natl Acad Sci U S A       Date:  1984-04       Impact factor: 11.205

6.  Embryonic expression patterns of the Drosophila decapentaplegic gene: separate regulatory elements control blastoderm expression and lateral ectodermal expression.

Authors:  P D Jackson; F M Hoffmann
Journal:  Dev Dyn       Date:  1994-01       Impact factor: 3.780

7.  Interactions of zeste mutations with loci exhibiting transvection effects in Drosophila melanogaster.

Authors:  W M Gelbart; C T Wu
Journal:  Genetics       Date:  1982-10       Impact factor: 4.562

8.  Decapentaplegic: a gene complex affecting morphogenesis in Drosophila melanogaster.

Authors:  F A Spencer; F M Hoffmann; W M Gelbart
Journal:  Cell       Date:  1982-03       Impact factor: 41.582

9.  The decapentaplegic gene is required for dorsal-ventral patterning of the Drosophila embryo.

Authors:  V F Irish; W M Gelbart
Journal:  Genes Dev       Date:  1987-10       Impact factor: 11.361

10.  Compatibility between enhancers and promoters determines the transcriptional specificity of gooseberry and gooseberry neuro in the Drosophila embryo.

Authors:  X Li; M Noll
Journal:  EMBO J       Date:  1994-01-15       Impact factor: 11.598

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  17 in total

1.  Developmental genetics of the essential Drosophila nucleoporin nup154: allelic differences due to an outward-directed promoter in the P-element 3' end.

Authors:  A A Kiger; S Gigliotti; M T Fuller
Journal:  Genetics       Date:  1999-10       Impact factor: 4.562

2.  Evidence of abundant stop codon readthrough in Drosophila and other metazoa.

Authors:  Irwin Jungreis; Michael F Lin; Rebecca Spokony; Clara S Chan; Nicolas Negre; Alec Victorsen; Kevin P White; Manolis Kellis
Journal:  Genome Res       Date:  2011-10-12       Impact factor: 9.043

Review 3.  Hydroxylation and translational adaptation to stress: some answers lie beyond the STOP codon.

Authors:  M J Katz; L Gándara; A L De Lella Ezcurra; P Wappner
Journal:  Cell Mol Life Sci       Date:  2016-02-13       Impact factor: 9.261

4.  Identification of chromosome inheritance modifiers in Drosophila melanogaster.

Authors:  K W Dobie; C D Kennedy; V M Velasco; T L McGrath; J Weko; R W Patterson; G H Karpen
Journal:  Genetics       Date:  2001-04       Impact factor: 4.562

5.  Identification of putative programmed -1 ribosomal frameshift signals in large DNA databases.

Authors:  A B Hammell; R C Taylor; S W Peltz; J D Dinman
Journal:  Genome Res       Date:  1999-05       Impact factor: 9.043

6.  Translational readthrough in the hdc mRNA generates a novel branching inhibitor in the drosophila trachea.

Authors:  P Steneberg; C Englund; J Kronhamn; T A Weaver; C Samakovlis
Journal:  Genes Dev       Date:  1998-04-01       Impact factor: 11.361

7.  Revisiting the protein-coding gene catalog of Drosophila melanogaster using 12 fly genomes.

Authors:  Michael F Lin; Joseph W Carlson; Madeline A Crosby; Beverley B Matthews; Charles Yu; Soo Park; Kenneth H Wan; Andrew J Schroeder; L Sian Gramates; Susan E St Pierre; Margaret Roark; Kenneth L Wiley; Rob J Kulathinal; Peili Zhang; Kyl V Myrick; Jerry V Antone; Susan E Celniker; William M Gelbart; Manolis Kellis
Journal:  Genome Res       Date:  2007-11-07       Impact factor: 9.043

8.  Local transposition of a hobo element within the decapentaplegic locus of Drosophila.

Authors:  S J Newfeld; N T Takaesu
Journal:  Genetics       Date:  1999-01       Impact factor: 4.562

9.  Many P-element insertions affect wing shape in Drosophila melanogaster.

Authors:  Kenneth Weber; Nancy Johnson; David Champlin; April Patty
Journal:  Genetics       Date:  2004-11-15       Impact factor: 4.562

10.  Versatile dual reporter gene systems for investigating stop codon readthrough in plants.

Authors:  Nga T Lao; Alan P Maloney; John F Atkins; Tony A Kavanagh
Journal:  PLoS One       Date:  2009-10-09       Impact factor: 3.240

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