Literature DB >> 7756529

Photoinduced volume change and energy storage associated with the early transformations of the photoactive yellow protein from Ectothiorhodospira halophila.

M E van Brederode1, T Gensch, W D Hoff, K J Hellingwerf, S E Braslavsky.   

Abstract

The photocycle of the photoactive yellow protein (PYP) isolated from Ectothiorhodospira halophila was analyzed by flash photolysis with absorption detection at low excitation photon densities and by temperature-dependent laser-induced optoacoustic spectroscopy (LIOAS). The quantum yield for the bleaching recovery of PYP, assumed to be identical to that for the phototransformation of PYP (pG), to the red-shifted intermediate, pR, was phi R = 0.35 +/- 0.05, much lower than the value of 0.64 reported in the literature. With this value and the LIOAS data, an energy content for pR of 120 kJ/mol was obtained, approximately 50% lower than for excited pG. Concomitant with the photochemical process, a volume contraction of 14 ml/photoconverted mol was observed, comparable with the contraction (11 ml/mol) determined for the bacteriorhodopsin monomer. The contraction in both cases is interpreted to arise from a protein reorganization around a phototransformed chromophore with a dipole moment different from that of the initial state. The deviations from linearity of the LIOAS data at photon densities > 0.3 photons per molecule are explained by absorption by pG and pR during the laser pulse duration (i.e., a four-level system, pG, pR, and their respective excited states). The data can be fitted either by a simple saturation process or by a photochromic equilibrium between pG and pR, similar to that established between the parent chromoprotein and the first intermediate(s) in other biological photoreceptors. This nonlinearity has important consequences for the interpretation of the data obtained from in vitro studies with powerful lasers.

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Year:  1995        PMID: 7756529      PMCID: PMC1281832          DOI: 10.1016/S0006-3495(95)80284-5

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  27 in total

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Authors:  J W Lewis; D S Kliger
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Review 2.  Events in the phytochrome molecule after irradiation.

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Review 3.  From femtoseconds to biology: mechanism of bacteriorhodopsin's light-driven proton pump.

Authors:  R A Mathies; S W Lin; J B Ames; W T Pollard
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4.  The effects of porphyrin structure and aggregation state on photosensitized processes in aqueous and micellar media.

Authors:  C R Lambert; E Reddi; J D Spikes; M A Rodgers; G Jori
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5.  Measurement and global analysis of the absorbance changes in the photocycle of the photoactive yellow protein from Ectothiorhodospira halophila.

Authors:  W D Hoff; I H van Stokkum; H J van Ramesdonk; M E van Brederode; A M Brouwer; J C Fitch; T E Meyer; R van Grondelle; K J Hellingwerf
Journal:  Biophys J       Date:  1994-10       Impact factor: 4.033

6.  The photoactive yellow protein from Ectothiorhodospira halophila as studied with a highly specific polyclonal antiserum: (intra)cellular localization, regulation of expression, and taxonomic distribution of cross-reacting proteins.

Authors:  W D Hoff; W W Sprenger; P W Postma; T E Meyer; M Veenhuis; T Leguijt; K J Hellingwerf
Journal:  J Bacteriol       Date:  1994-07       Impact factor: 3.490

7.  Thiol ester-linked p-coumaric acid as a new photoactive prosthetic group in a protein with rhodopsin-like photochemistry.

Authors:  W D Hoff; P Düx; K Hård; B Devreese; I M Nugteren-Roodzant; W Crielaard; R Boelens; R Kaptein; J van Beeumen; K J Hellingwerf
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8.  Properties of a water-soluble, yellow protein isolated from a halophilic phototrophic bacterium that has photochemical activity analogous to sensory rhodopsin.

Authors:  T E Meyer; E Yakali; M A Cusanovich; G Tollin
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9.  Photoreactions of macrocyclic dyes bound to human serum albumin.

Authors:  J Davila; A Harriman
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10.  Photoactive yellow protein from the purple phototrophic bacterium, Ectothiorhodospira halophila. Quantum yield of photobleaching and effects of temperature, alcohols, glycerol, and sucrose on kinetics of photobleaching and recovery.

Authors:  T E Meyer; G Tollin; J H Hazzard; M A Cusanovich
Journal:  Biophys J       Date:  1989-09       Impact factor: 4.033

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  23 in total

1.  Time-resolved absorption and photothermal measurements with sensory rhodopsin I from Halobacterium salinarum.

Authors:  A Losi; S E Braslavsky; W Gärtner; J L Spudich
Journal:  Biophys J       Date:  1999-04       Impact factor: 4.033

2.  Early intermediates in the photocycle of the Glu46Gln mutant of photoactive yellow protein: femtosecond spectroscopy.

Authors:  S Devanathan; S Lin; M A Cusanovich; N Woodbury; G Tollin
Journal:  Biophys J       Date:  2000-10       Impact factor: 4.033

3.  Transient exposure of hydrophobic surface in the photoactive yellow protein monitored with Nile Red.

Authors:  Johnny Hendriks; Thomas Gensch; Lene Hviid; Michael A van Der Horst; Klaas J Hellingwerf; Jasper J van Thor
Journal:  Biophys J       Date:  2002-03       Impact factor: 4.033

4.  A spectrally silent transformation in the photolysis of octopus rhodopsin: a protein conformational change without any accompanying change of the chromophore's absorption.

Authors:  Y Nishioku; M Nakagawa; M Tsuda; M Terazima
Journal:  Biophys J       Date:  2001-06       Impact factor: 4.033

5.  Structural change of site-directed mutants of PYP: new dynamics during pR state.

Authors:  Kan Takeshita; Yasushi Imamoto; Mikio Kataoka; Ken'ichi Mihara; Fumio Tokunaga; Masahide Terazima
Journal:  Biophys J       Date:  2002-09       Impact factor: 4.033

6.  Energetics and volume changes of the intermediates in the photolysis of octopus rhodopsin at a physiological temperature.

Authors:  Yoshinori Nishioku; Masashi Nakagawa; Motoyuki Tsuda; Masahide Terazima
Journal:  Biophys J       Date:  2002-08       Impact factor: 4.033

7.  Photoisomerization and photoionization of the photoactive yellow protein chromophore in solution.

Authors:  Delmar S Larsen; Mikas Vengris; Ivo H M van Stokkum; Michael A van der Horst; Frank L de Weerd; Klaas J Hellingwerf; Rienk van Grondelle
Journal:  Biophys J       Date:  2004-04       Impact factor: 4.033

8.  Primary steps of the photoactive yellow protein: isolated chromophore dynamics and protein directed function.

Authors:  I-Ren Lee; Wonchul Lee; Ahmed H Zewail
Journal:  Proc Natl Acad Sci U S A       Date:  2006-01-03       Impact factor: 11.205

Review 9.  Proton transfer reactions and hydrogen-bond networks in protein environments.

Authors:  Hiroshi Ishikita; Keisuke Saito
Journal:  J R Soc Interface       Date:  2013-11-27       Impact factor: 4.118

10.  On the involvement of single-bond rotation in the primary photochemistry of photoactive yellow protein.

Authors:  Andreas D Stahl; Marijke Hospes; Kushagra Singhal; Ivo van Stokkum; Rienk van Grondelle; Marie Louise Groot; Klaas J Hellingwerf
Journal:  Biophys J       Date:  2011-09-07       Impact factor: 4.033

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