Literature DB >> 7731039

Structure and oxygen affinity of crystalline desArg141 alpha human hemoglobin A in the T state.

J S Kavanaugh1, D R Chafin, A Arnone, A Mozzarelli, C Rivetti, G L Rossi, L D Kwiatkowski, R W Noble.   

Abstract

The correlation of a protein structure determined crystallographically to its functional properties determined in solution can be an extremely complex problem due to potential differences of protein conformational flexibility in the two physical states. A more direct approach to the correlation of structure with function is to examine both the structure and the function of a protein in the same crystalline environment. In this paper, the structural and functional properties of T state desArg hemoglobin (human hemoglobin modified by removal of the alpha-chain COOH-terminal residue, Arg141 alpha) have been studied in the same crystal form by high resolution X-ray diffraction methods and by polarized absorption microspectrophotometry. Specifically, the crystal structure of deoxygenated desArg human hemoglobin has been refined at a 2.1 A resolution using crystals grown at low salt concentration from solutions of polyethylene glycol. The loss of Arg141 alpha and all of the salt bridges in which it participates is associated with subtle structural perturbations of the alpha-chains which include an increase in the conformational flexibility of both the NH2 and COOH-terminal peptides. Although the heme pockets appear unchanged and even the side-chain of Tyr140 is oriented nearly as in HbA, the functional characterization by microspectrophotometric measurements indicates that crystals of desArg hemoglobin bind oxygen with an affinity which is roughly 15-fold greater than that of crystals of human hemoglobin A. There is no alkaline Bohr effect or effect of chloride ions, but an acid Bohr effect is observed. The oxygen affinities measured along two principal axes of the crystals differ by 25%, indicating heterogeneity in the affinities of the oxygen binding sites. This finding and the measured Hill coefficient of unity suggest significant cooperativity in the binding of oxygen in these crystals. The origins of the observed heterogeneity and the implied cooperativity are unknown.

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Year:  1995        PMID: 7731039     DOI: 10.1006/jmbi.1995.0207

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  11 in total

1.  High and low oxygen affinity conformations of T state hemoglobin.

Authors:  S Bruno; M Bonaccio; S Bettati; C Rivetti; C Viappiani; S Abbruzzetti; A Mozzarelli
Journal:  Protein Sci       Date:  2001-11       Impact factor: 6.725

2.  Modulation of reactivity and conformation within the T-quaternary state of human hemoglobin: the combined use of mutagenesis and sol-gel encapsulation.

Authors:  Uri Samuni; Camille J Roche; David Dantsker; Laura J Juszczak; Joel M Friedman
Journal:  Biochemistry       Date:  2006-03-07       Impact factor: 3.162

3.  Allosteric effectors do not alter the oxygen affinity of hemoglobin crystals.

Authors:  A Mozzarelli; C Rivetti; G L Rossi; W A Eaton; E R Henry
Journal:  Protein Sci       Date:  1997-02       Impact factor: 6.725

4.  Oxygen binding by alpha(Fe2+)2beta(Ni2+)2 hemoglobin crystals.

Authors:  S Bruno; S Bettati; M Manfredini; A Mozzarelli; M Bolognesi; D Deriu; C Rosano; A Tsuneshige; T Yonetani; E R Henry
Journal:  Protein Sci       Date:  2000-04       Impact factor: 6.725

5.  Site-directed mutations of human hemoglobin at residue 35beta: a residue at the intersection of the alpha1beta1, alpha1beta2, and alpha1alpha2 interfaces.

Authors:  J S Kavanaugh; J A Weydert; P H Rogers; A Arnone; H L Hui; A M Wierzba; L D Kwiatkowski; P Paily; R W Noble; S Bruno; A Mozzarelli
Journal:  Protein Sci       Date:  2001-09       Impact factor: 6.725

6.  Very empirical treatment of solvation and entropy: a force field derived from log Po/w.

Authors:  G E Kellogg; J C Burnett; D J Abraham
Journal:  J Comput Aided Mol Des       Date:  2001-04       Impact factor: 3.686

7.  Tertiary and quaternary allostery in tetrameric hemoglobin from Scapharca inaequivalvis.

Authors:  Luca Ronda; Stefano Bettati; Eric R Henry; Tara Kashav; Jeffrey M Sanders; William E Royer; Andrea Mozzarelli
Journal:  Biochemistry       Date:  2013-03-15       Impact factor: 3.162

8.  Correlation of protein functional properties in the crystal and in solution: the case study of T-state hemoglobin.

Authors:  Robert W Noble; Laura D Kwiatkowski; Hilda L Hui; Stefano Bruno; Stefano Bettati; Andrea Mozzarelli
Journal:  Protein Sci       Date:  2002-07       Impact factor: 6.725

9.  Structure of fully liganded Hb ζ2β2s trapped in a tense conformation.

Authors:  Martin K Safo; Tzu-Ping Ko; Osheiza Abdulmalik; Zhenning He; Andrew H-J Wang; Eric R Schreiter; J Eric Russell
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2013-09-20

Review 10.  From protein structure to function via single crystal optical spectroscopy.

Authors:  Luca Ronda; Stefano Bruno; Stefano Bettati; Paola Storici; Andrea Mozzarelli
Journal:  Front Mol Biosci       Date:  2015-04-28
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