Literature DB >> 7729513

Beta-glucosidase, beta-galactosidase, family A cellulases, family F xylanases and two barley glycanases form a superfamily of enzymes with 8-fold beta/alpha architecture and with two conserved glutamates near the carboxy-terminal ends of beta-strands four and seven.

J Jenkins1, L Lo Leggio, G Harris, R Pickersgill.   

Abstract

Comparison of the recently determined crystal structures Pseudomonas fluorescens subsp. cellulosa family F xylanase, (1-3)-beta-glucanase and (1-3,1-4)-beta-glucanase and the catalytic domain of E. coli beta-galactosidase reveals that they belong to a superfamily of 8-fold beta/alpha-barrels with similar amino acid residues at their active sites. In the three families that these enzymes represent, the nucleophile is a glutamate, which is located close to the carboxy-terminus of beta-strand seven. In addition all three enzymes have the sequence asparagine-glutamate close to the carboxy-terminus of beta-strand four. This glutamate has been identified as the acid/base in the family F xylanases and is essential for catalysis in beta-galactosidase. We suggest that the equivalent residue in the barley glucanases is the acid/base. Analysis of the sequences of family 1 beta-glucosidases and family 5 cellulases shows that these enzymes also belong to this superfamily which we call the 4/7 superfamily.

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Year:  1995        PMID: 7729513     DOI: 10.1016/0014-5793(95)00252-5

Source DB:  PubMed          Journal:  FEBS Lett        ISSN: 0014-5793            Impact factor:   4.124


  48 in total

1.  Identification of the catalytic residues of the first family of beta(1-3)glucanosyltransferases identified in fungi.

Authors:  I Mouyna; M Monod; T Fontaine; B Henrissat; B Léchenne; J P Latgé
Journal:  Biochem J       Date:  2000-05-01       Impact factor: 3.857

Review 2.  Structure and function of pectic enzymes: virulence factors of plant pathogens.

Authors:  S R Herron; J A Benen; R D Scavetta; J Visser; F Jurnak
Journal:  Proc Natl Acad Sci U S A       Date:  2000-08-01       Impact factor: 11.205

3.  Antibody to glucosyltransferase induced by synthetic peptides associated with catalytic regions of alpha-amylases.

Authors:  D J Smith; R L Heschel; W F King; M A Taubman
Journal:  Infect Immun       Date:  1999-05       Impact factor: 3.441

Review 4.  The biochemistry and structural biology of plant cell wall deconstruction.

Authors:  Harry J Gilbert
Journal:  Plant Physiol       Date:  2010-04-20       Impact factor: 8.340

5.  Structural insights into the substrate specificity of Streptococcus pneumoniae β(1,3)-galactosidase BgaC.

Authors:  Wang Cheng; Lei Wang; Yong-Liang Jiang; Xiao-Hui Bai; Jun Chu; Qiong Li; Ge Yu; Qiu-Ling Liang; Cong-Zhao Zhou; Yuxing Chen
Journal:  J Biol Chem       Date:  2012-05-16       Impact factor: 5.157

6.  Structural modeling of glucanase-substrate complexes suggests a conserved tyrosine is involved in carbohydrate recognition in plant 1,3-1,4-beta-D-glucanases.

Authors:  Li-Chu Tsai; Yi-Ning Chen; Lie-Fen Shyur
Journal:  J Comput Aided Mol Des       Date:  2008-07-29       Impact factor: 3.686

7.  Knowledge-based model of a glucosyltransferase from the oral bacterial group of mutans streptococci.

Authors:  K S Devulapalle; S D Goodman; Q Gao; A Hemsley; G Mooser
Journal:  Protein Sci       Date:  1997-12       Impact factor: 6.725

8.  Overexpression and characterization of a novel cold-adapted and salt-tolerant GH1 β-glucosidase from the marine bacterium Alteromonas sp. L82.

Authors:  Jingjing Sun; Wei Wang; Congyu Yao; Fangqun Dai; Xiangjie Zhu; Junzhong Liu; Jianhua Hao
Journal:  J Microbiol       Date:  2018-08-23       Impact factor: 3.422

9.  Cloning, purification and biochemical characterisation of a GH35 beta-1,3/beta-1,6-galactosidase from the mucin-degrading gut bacterium Akkermansia muciniphila.

Authors:  Bi-Shan Guo; Feng Zheng; Lucy Crouch; Zhi-Peng Cai; Meng Wang; David N Bolam; Li Liu; Josef Voglmeir
Journal:  Glycoconj J       Date:  2018-05-12       Impact factor: 2.916

10.  Crystal structure and snapshots along the reaction pathway of a family 51 alpha-L-arabinofuranosidase.

Authors:  Klaus Hövel; Dalia Shallom; Karsten Niefind; Valery Belakhov; Gil Shoham; Timor Baasov; Yuval Shoham; Dietmar Schomburg
Journal:  EMBO J       Date:  2003-10-01       Impact factor: 11.598

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