Literature DB >> 7729424

TBP mutants defective in activated transcription in vivo.

K M Arndt1, S Ricupero-Hovasse, F Winston.   

Abstract

The TATA box binding protein (TBP) plays a central and essential role in transcription initiation. At TATA box-containing genes transcribed by RNA polymerase II, TBP binds to the promoter and initiates the assembly of a multiprotein preinitiation complex. Several studies have suggested that binding of TBP to the TATA box is an important regulatory step in transcription initiation in vitro. To determine whether TBP is a target of regulatory factors in vivo, we performed a genetic screen in yeast for TBP mutants defective in activated transcription. One class of TBP mutants identified in this screen comprises inositol auxotrophs that are also defective in using galactose as a carbon source. These phenotypes are due to promoter-specific defects in transcription initiation that are governed by the upstream activating sequence (UAS) and apparently not by the sequence of the TATA element. The finding that these TBP mutants are severely impaired in DNA binding in vitro suggests that transcription initiation at certain genes is regulated at the level of TATA box binding by TBP in vivo.

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Year:  1995        PMID: 7729424      PMCID: PMC398236          DOI: 10.1002/j.1460-2075.1995.tb07135.x

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  72 in total

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Authors:  B F Pugh; R Tjian
Journal:  J Biol Chem       Date:  1992-01-15       Impact factor: 5.157

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Authors:  R G Roeder
Journal:  Trends Biochem Sci       Date:  1991-11       Impact factor: 13.807

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Authors:  S Scherer; R W Davis
Journal:  Proc Natl Acad Sci U S A       Date:  1979-10       Impact factor: 11.205

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Authors:  Y J Kim; S Björklund; Y Li; M H Sayre; R D Kornberg
Journal:  Cell       Date:  1994-05-20       Impact factor: 41.582

5.  Effects of activation-defective TBP mutations on transcription initiation in yeast.

Authors:  T K Kim; S Hashimoto; R J Kelleher; P M Flanagan; R D Kornberg; M Horikoshi; R G Roeder
Journal:  Nature       Date:  1994-05-19       Impact factor: 49.962

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Authors:  M Carlson; B C Laurent
Journal:  Curr Opin Cell Biol       Date:  1994-06       Impact factor: 8.382

7.  Increased recruitment of TATA-binding protein to the promoter by transcriptional activation domains in vivo.

Authors:  C Klein; K Struhl
Journal:  Science       Date:  1994-10-14       Impact factor: 47.728

8.  Construction of a set of convenient Saccharomyces cerevisiae strains that are isogenic to S288C.

Authors:  F Winston; C Dollard; S L Ricupero-Hovasse
Journal:  Yeast       Date:  1995-01       Impact factor: 3.239

9.  A GAL10-CYC1 hybrid yeast promoter identifies the GAL4 regulatory region as an upstream site.

Authors:  L Guarente; R R Yocum; P Gifford
Journal:  Proc Natl Acad Sci U S A       Date:  1982-12       Impact factor: 11.205

10.  Stimulation of GAL4 derivative binding to nucleosomal DNA by the yeast SWI/SNF complex.

Authors:  J Côté; J Quinn; J L Workman; C L Peterson
Journal:  Science       Date:  1994-07-01       Impact factor: 47.728

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  46 in total

1.  Genetic evidence for selective degradation of RNA polymerase subunits by the 20S proteasome in Saccharomyces cerevisiae.

Authors:  S Nouraini; D Xu; S Nelson; M Lee; J D Friesen
Journal:  Nucleic Acids Res       Date:  1997-09-15       Impact factor: 16.971

2.  The REG1 gene product is required for repression of INO1 and other inositol-sensitive upstream activating sequence-containing genes of yeast.

Authors:  Q Ouyang; M Ruiz-Noriega; S A Henry
Journal:  Genetics       Date:  1999-05       Impact factor: 4.562

3.  Evidence for the involvement of the Glc7-Reg1 phosphatase and the Snf1-Snf4 kinase in the regulation of INO1 transcription in Saccharomyces cerevisiae.

Authors:  M K Shirra; K M Arndt
Journal:  Genetics       Date:  1999-05       Impact factor: 4.562

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Authors:  M D Rabenstein; S Zhou; J T Lis; R Tjian
Journal:  Proc Natl Acad Sci U S A       Date:  1999-04-27       Impact factor: 11.205

5.  Histone H3 phosphorylation can promote TBP recruitment through distinct promoter-specific mechanisms.

Authors:  Wan-Sheng Lo; Eric R Gamache; Karl W Henry; David Yang; Lorraine Pillus; Shelley L Berger
Journal:  EMBO J       Date:  2005-02-17       Impact factor: 11.598

Review 6.  Genetic regulation of phospholipid biosynthesis in Saccharomyces cerevisiae.

Authors:  M L Greenberg; J M Lopes
Journal:  Microbiol Rev       Date:  1996-03

Review 7.  Molecular genetics of the RNA polymerase II general transcriptional machinery.

Authors:  M Hampsey
Journal:  Microbiol Mol Biol Rev       Date:  1998-06       Impact factor: 11.056

8.  A chemical genomics study identifies Snf1 as a repressor of GCN4 translation.

Authors:  Margaret K Shirra; Rhonda R McCartney; Chao Zhang; Kevan M Shokat; Martin C Schmidt; Karen M Arndt
Journal:  J Biol Chem       Date:  2008-10-27       Impact factor: 5.157

9.  Identification of seven hydrophobic clusters in GCN4 making redundant contributions to transcriptional activation.

Authors:  B M Jackson; C M Drysdale; K Natarajan; A G Hinnebusch
Journal:  Mol Cell Biol       Date:  1996-10       Impact factor: 4.272

10.  SPT20/ADA5 encodes a novel protein functionally related to the TATA-binding protein and important for transcription in Saccharomyces cerevisiae.

Authors:  S M Roberts; F Winston
Journal:  Mol Cell Biol       Date:  1996-06       Impact factor: 4.272

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