Literature DB >> 7700869

Circularly permuted dihydrofolate reductase of E. coli has functional activity and a destabilized tertiary structure.

M L Kireeva, N V Murzina, A G Murzin, V N Uversky, O I Gryaznova, A T Gudkov.   

Abstract

Three circularly permuted variants of Escherichia coli dihydrofolate reductase genes were constructed. Linkers coding tri- and pentapeptides were used to connect the natural 5'- and 3'-terminal ends. Only one variant of circularly permuted protein with tripeptide linker and the cleavage of the peptide bond between 107 and 108 amino acid residues was produced in a good yield. The expressed protein was insoluble in the cells, but at pH 8.0 and higher the isolated protein was soluble. Enzymatic assay and physical studies have shown that permuted dihydrofolate reductase has a destabilized tertiary structure. Only the addition of the natural substrates or inhibitors lead to the protein with the native-like structure and functional activity.

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Year:  1994        PMID: 7700869     DOI: 10.1093/protein/7.11.1373

Source DB:  PubMed          Journal:  Protein Eng        ISSN: 0269-2139


  12 in total

1.  In vivo assembly of aspartate transcarbamoylase from fragmented and circularly permuted catalytic polypeptide chains.

Authors:  X Ni; H K Schachman
Journal:  Protein Sci       Date:  2001-03       Impact factor: 6.725

2.  Oligomerization domain-directed reassembly of active dihydrofolate reductase from rationally designed fragments.

Authors:  J N Pelletier; F X Campbell-Valois; S W Michnick
Journal:  Proc Natl Acad Sci U S A       Date:  1998-10-13       Impact factor: 11.205

3.  Circularly permuted dihydrofolate reductase possesses all the properties of the molten globule state, but can resume functional tertiary structure by interaction with its ligands.

Authors:  V N Uversky; V P Kutyshenko; V V Rogov; K S Vassilenko; A T Gudkov
Journal:  Protein Sci       Date:  1996-09       Impact factor: 6.725

4.  Random circular permutation of genes and expressed polypeptide chains: application of the method to the catalytic chains of aspartate transcarbamoylase.

Authors:  R Graf; H K Schachman
Journal:  Proc Natl Acad Sci U S A       Date:  1996-10-15       Impact factor: 11.205

5.  Comparative laboratory evolution of ordered and disordered enzymes.

Authors:  Cindy Schulenburg; Yvonne Stark; Matthias Künzle; Donald Hilvert
Journal:  J Biol Chem       Date:  2015-02-19       Impact factor: 5.157

6.  Testing the role of chain connectivity on the stability and structure of dihydrofolate reductase from E. coli: fragment complementation and circular permutation reveal stable, alternatively folded forms.

Authors:  V F Smith; C R Matthews
Journal:  Protein Sci       Date:  2001-01       Impact factor: 6.725

7.  Conformational heterogeneity and intrinsic disorder in enzyme regulation: Glucokinase as a case study.

Authors:  Mioara Larion; Brian Miller; Rafael Brüschweiler
Journal:  Intrinsically Disord Proteins       Date:  2015-04-22

8.  In vivo formation of allosteric aspartate transcarbamoylase containing circularly permuted catalytic polypeptide chains: implications for protein folding and assembly.

Authors:  P Zhang; H K Schachman
Journal:  Protein Sci       Date:  1996-07       Impact factor: 6.725

9.  The Structure of a Thermophilic Kinase Shapes Fitness upon Random Circular Permutation.

Authors:  Alicia M Jones; Manan M Mehta; Emily E Thomas; Joshua T Atkinson; Thomas H Segall-Shapiro; Shirley Liu; Jonathan J Silberg
Journal:  ACS Synth Biol       Date:  2016-03-25       Impact factor: 5.110

Review 10.  A decade and a half of protein intrinsic disorder: biology still waits for physics.

Authors:  Vladimir N Uversky
Journal:  Protein Sci       Date:  2013-04-29       Impact factor: 6.725

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