Literature DB >> 7698998

Internal structure of the 30 nm chromatin fiber.

S Bartolomé1, A Bermúdez, J R Daban.   

Abstract

In the presence of 1.7 mM Mg2+, the diameter of the circular structures produced by small chromatin fragments isolated from chicken erythrocytes remains essentially unchanged when the number of nucleosomes in these fragments increases from 10 to 36. In contrast, the results obtained in unidirectional shadowing experiments show that under the same conditions the height of the chromatin fragments increases with the number of nucleosomes. These observations indicate that the electron microscope images studied in this work correspond to a top view of small chromatin fragments. Rotary-shadowed chromatin fragments show three parts: (a) a contour with a heavy deposition of platinum; (b) an annular zone between the central region and the periphery; and (c) a central hole. The heterogeneous ring generated by the deposition of platinum in the periphery suggests that nucleosomes form a one-start helix (5-7 nucleosomes per turn) that apparently can be left- or right-handed. The annular region (thickness of about 11 nm) shows spokes probably due to flat faces and core DNA of radially oriented nucleosomes. The central hole (8-12 nm) is clearly seen in many images but it is not empty because some deformed fragments show coated material (probably linker DNA) that protrudes from this central depression. We have observed that these structural elements directly detected in short chromatin fragments are also present in long chromatin fibers. This allows us to conclude that these elements are basic structural components of the 30 nm chromatin fiber.

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Year:  1994        PMID: 7698998     DOI: 10.1242/jcs.107.11.2983

Source DB:  PubMed          Journal:  J Cell Sci        ISSN: 0021-9533            Impact factor:   5.285


  10 in total

1.  Electrostatic mechanism of nucleosomal array folding revealed by computer simulation.

Authors:  Jian Sun; Qing Zhang; Tamar Schlick
Journal:  Proc Natl Acad Sci U S A       Date:  2005-05-26       Impact factor: 11.205

2.  Structural elements of bulk chromatin within metaphase chromosomes.

Authors:  Juan Manuel Caravaca; Silvia Caño; Isaac Gállego; Joan-Ramon Daban
Journal:  Chromosome Res       Date:  2005-10-24       Impact factor: 5.239

3.  EM measurements define the dimensions of the "30-nm" chromatin fiber: evidence for a compact, interdigitated structure.

Authors:  Philip J J Robinson; Louise Fairall; Van A T Huynh; Daniela Rhodes
Journal:  Proc Natl Acad Sci U S A       Date:  2006-04-14       Impact factor: 11.205

4.  Highly compact folding of chromatin induced by cellular cation concentrations. Evidence from atomic force microscopy studies in aqueous solution.

Authors:  Silvia Caño; Juan Manuel Caravaca; Marc Martín; Joan-Ramon Daban
Journal:  Eur Biophys J       Date:  2006-03-30       Impact factor: 1.733

5.  Dense chromatin plates in metaphase chromosomes.

Authors:  Isaac Gállego; Pablo Castro-Hartmann; Juan Manuel Caravaca; Silvia Caño; Joan-Ramon Daban
Journal:  Eur Biophys J       Date:  2009-02-03       Impact factor: 1.733

6.  Frozen-hydrated chromatin from metaphase chromosomes has an interdigitated multilayer structure.

Authors:  Andrea Chicano; Eva Crosas; Joaquín Otón; Roberto Melero; Benjamin D Engel; Joan-Ramon Daban
Journal:  EMBO J       Date:  2019-01-04       Impact factor: 11.598

7.  Self-assembly of thin plates from micrococcal nuclease-digested chromatin of metaphase chromosomes.

Authors:  Maria Milla; Joan-Ramon Daban
Journal:  Biophys J       Date:  2012-08-08       Impact factor: 4.033

8.  The energy components of stacked chromatin layers explain the morphology, dimensions and mechanical properties of metaphase chromosomes.

Authors:  Joan-Ramon Daban
Journal:  J R Soc Interface       Date:  2014-01-08       Impact factor: 4.118

9.  Modelling and DNA topology of compact 2-start and 1-start chromatin fibres.

Authors:  Chenyi Wu; Andrew Travers
Journal:  Nucleic Acids Res       Date:  2019-10-10       Impact factor: 16.971

10.  An all-atom model of the chromatin fiber containing linker histones reveals a versatile structure tuned by the nucleosomal repeat length.

Authors:  Hua Wong; Jean-Marc Victor; Julien Mozziconacci
Journal:  PLoS One       Date:  2007-09-12       Impact factor: 3.240

  10 in total

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