Literature DB >> 7670384

Volume changes of the molten globule transitions of horse heart ferricytochrome c: a thermodynamic cycle.

K Foygel1, S Spector, S Chatterjee, P C Kahn.   

Abstract

Volume changes among the unfolded (U), native (N), and molten globule (MG) conformations of horse heart ferricytochrome c have been measured. U to N (pH 2 to pH 7) was determined in the absence of added salt to be -136 +/- 5 mL/mol protein. U to MG (pH 2, no added salt to pH 2, 0.5 M KCl) yielded + 100 +/- 6 mL/mol. MG to N was broken into two steps, N to NClx at pH 7 by addition of buffered KCl to buffered protein lacking added salt (NClx = N interacting with an unknown number, X, of chloride ions), and MG to NClx by jumping MG at pH 2 in 0.5 M KCl to pH7 at the same salt concentration. The delta V of N to NClx was -30.9 +/- 1.4 mL/mol protein, whereas MG to NClx entailed a delta V of -235 +/- 6 mL/mol. Within experimental error, the results add up to zero for a complete thermodynamic cycle. We believe this to be the first volumetric cycle to have been measured for the conformational transitions of a protein. The results are discussed in terms of hydration contributions from deprotonation of the protein, other hydration effects, and the formation and/or enlargement of packing defects in the protein's tertiary structure during the steps of folding.

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Year:  1995        PMID: 7670384      PMCID: PMC2143161          DOI: 10.1002/pro.5560040717

Source DB:  PubMed          Journal:  Protein Sci        ISSN: 0961-8368            Impact factor:   6.725


  29 in total

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Journal:  J Mol Biol       Date:  1977-05-25       Impact factor: 5.469

2.  Volume changes in the formation of internal complexes of flavinyltryptophan peptides.

Authors:  A J Visser; T M Li; H G Drickamer; G Weber
Journal:  Biochemistry       Date:  1977-11-01       Impact factor: 3.162

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Authors:  R W Shaw; C R Hartzell
Journal:  Biochemistry       Date:  1976-05-04       Impact factor: 3.162

4.  Stabilization of the globular structure of ferricytochrome c by chloride in acidic solvents.

Authors:  E Stellwagen; J Babul
Journal:  Biochemistry       Date:  1975-11-18       Impact factor: 3.162

5.  Hydrophobic bonding and accessible surface area in proteins.

Authors:  C Chothia
Journal:  Nature       Date:  1974-03-22       Impact factor: 49.962

6.  Participation of the protein ligands in the folding of cytochrome c.

Authors:  J Babul; E Stellwagen
Journal:  Biochemistry       Date:  1972-03-28       Impact factor: 3.162

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Authors:  B Lee; F M Richards
Journal:  J Mol Biol       Date:  1971-02-14       Impact factor: 5.469

8.  Phosphate binding by cytochrome c. Specific binding site involved in the formation and reactivity of a complex of ferricytochrome c, ferrous ion, and phosphate.

Authors:  G Taborsky; K McCollum
Journal:  J Biol Chem       Date:  1979-08-10       Impact factor: 5.157

9.  Mapping of anion binding sites on cytochrome c by differential chemical modification of lysine residues.

Authors:  N Osheroff; D L Brautigan; E Margoliash
Journal:  Proc Natl Acad Sci U S A       Date:  1980-08       Impact factor: 11.205

10.  The effect of pressure on the molecular complex of isoalloxazine and adenine.

Authors:  G Weber; F Tanaka; B Y Okamoto; H G Drickamer
Journal:  Proc Natl Acad Sci U S A       Date:  1974-04       Impact factor: 11.205

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  7 in total

1.  Hydration and protein folding in water and in reverse micelles: compressibility and volume changes.

Authors:  D Valdez; J Y Le Huérou; M Gindre; W Urbach; M Waks
Journal:  Biophys J       Date:  2001-06       Impact factor: 4.033

2.  A molecular dynamics method for calculating molecular volume changes appropriate for biomolecular simulation.

Authors:  Russell DeVane; Christina Ridley; Randy W Larsen; Brian Space; Preston B Moore; Sunney I Chan
Journal:  Biophys J       Date:  2003-11       Impact factor: 4.033

3.  A non-native alpha-helix is formed in the beta-sheet region of the molten globule state of canine milk lysozyme.

Authors:  Masahiro Watanabe; Yoshihiro Kobashigawa; Tomoyasu Aizawa; Makoto Demura; Katsutoshi Nitta
Journal:  Protein J       Date:  2004-07       Impact factor: 2.371

4.  Effect of hydrostatic pressure on unfolding of alpha-lactalbumin: volumetric equivalence of the molten globule and unfolded state.

Authors:  Y Kobashigawa; M Sakurai; K Nitta
Journal:  Protein Sci       Date:  1999-12       Impact factor: 6.725

5.  Unfolding and refolding of bovine serum albumin at acid pH: ultrasound and structural studies.

Authors:  N El Kadi; N Taulier; J Y Le Huérou; M Gindre; W Urbach; I Nwigwe; P C Kahn; M Waks
Journal:  Biophys J       Date:  2006-07-21       Impact factor: 4.033

6.  Thermodynamic volume cycles for electron transfer in the cytochrome c oxidase and for the binding of cytochrome c to cytochrome c oxidase.

Authors:  J A Kornblatt; M J Kornblatt; I Rajotte; G H Hoa; P C Kahn
Journal:  Biophys J       Date:  1998-07       Impact factor: 4.033

7.  The measurement of volume change by capillary dilatometry.

Authors:  Peter C Kahn
Journal:  Protein Sci       Date:  2019-04-29       Impact factor: 6.725

  7 in total

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