Literature DB >> 7670383

The SEA module: a new extracellular domain associated with O-glycosylation.

P Bork1, L Patthy.   

Abstract

Using a variety of homology search methods and multiple alignments, a new extracellular module was identified in (1) agrin, (2) enterokinase, (3) a 63-kDa sea urchin sperm protein, (4) perlecan, (5) the breast cancer marker MUCI (episialin), (6) the cell surface antigen 114/A10, and (7/8) two functionally uncharacterized, probably extracellular, Caenorhabditis elegans proteins. Despite the functional diversity of these adhesive proteins, a common denominator seems to be their existence in heavily glycosylated environments. In addition, the better characterized proteins mentioned above contain all O-glycosidic-linked carbohydrates such as heparan sulfate that contribute considerably to their molecular masses. The common module might regulate or assist binding to neighboring carbohydrate moieties.

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Year:  1995        PMID: 7670383      PMCID: PMC2143162          DOI: 10.1002/pro.5560040716

Source DB:  PubMed          Journal:  Protein Sci        ISSN: 0961-8368            Impact factor:   6.725


  34 in total

1.  Basic local alignment search tool.

Authors:  S F Altschul; W Gish; W Miller; E W Myers; D J Lipman
Journal:  J Mol Biol       Date:  1990-10-05       Impact factor: 5.469

Review 2.  Protein modules.

Authors:  M Baron; D G Norman; I D Campbell
Journal:  Trends Biochem Sci       Date:  1991-01       Impact factor: 13.807

Review 3.  Enterokinase (enteropeptidase): comparative aspects.

Authors:  A Light; H Janska
Journal:  Trends Biochem Sci       Date:  1989-03       Impact factor: 13.807

Review 4.  Shuffled domains in extracellular proteins.

Authors:  P Bork
Journal:  FEBS Lett       Date:  1991-07-29       Impact factor: 4.124

5.  The Protein Data Bank: a computer-based archival file for macromolecular structures.

Authors:  F C Bernstein; T F Koetzle; G J Williams; E F Meyer; M D Brice; J R Rodgers; O Kennard; T Shimanouchi; M Tasumi
Journal:  J Mol Biol       Date:  1977-05-25       Impact factor: 5.469

Review 6.  Zona pellucida glycoproteins.

Authors:  P M Wassarman
Journal:  Annu Rev Biochem       Date:  1988       Impact factor: 23.643

7.  Molecular cloning of 114/A10, a cell surface antigen containing highly conserved repeated elements, which is expressed by murine hemopoietic progenitor cells and interleukin-3-dependent cell lines.

Authors:  G J Dougherty; R J Kay; R K Humphries
Journal:  J Biol Chem       Date:  1989-04-15       Impact factor: 5.157

8.  Detecting homology of distantly related proteins with consensus sequences.

Authors:  L Patthy
Journal:  J Mol Biol       Date:  1987-12-20       Impact factor: 5.469

Review 9.  Functions of agrin and agrin-related proteins.

Authors:  L Patthy; K Nikolics
Journal:  Trends Neurosci       Date:  1993-02       Impact factor: 13.837

10.  Structure and expression of a rat agrin.

Authors:  F Rupp; D G Payan; C Magill-Solc; D M Cowan; R H Scheller
Journal:  Neuron       Date:  1991-05       Impact factor: 17.173

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  39 in total

1.  Generation of ligand-receptor alliances by "SEA" module-mediated cleavage of membrane-associated mucin proteins.

Authors:  Daniel H Wreschner; Michael A McGuckin; Stefanie J Williams; Amos Baruch; Merav Yoeli; Ravit Ziv; Liron Okun; Joseph Zaretsky; Nechama Smorodinsky; Iafa Keydar; Pavlos Neophytou; Martin Stacey; His-Hsien Lin; Siamon Gordon
Journal:  Protein Sci       Date:  2002-03       Impact factor: 6.725

Review 2.  Mucins and blastocyst attachment.

Authors:  Amantha Thathiah; Daniel D Carson
Journal:  Rev Endocr Metab Disord       Date:  2002-05       Impact factor: 6.514

3.  CA125 in ovarian cancer.

Authors:  Nathalie Scholler; Nicole Urban
Journal:  Biomark Med       Date:  2007-12       Impact factor: 2.851

Review 4.  Post-translational regulation of signaling mucins.

Authors:  Paul J Cullen
Journal:  Curr Opin Struct Biol       Date:  2011-08-31       Impact factor: 6.809

5.  Expansion of divergent SEA domains in cell surface proteins and nucleoporin 54.

Authors:  Jimin Pei; Nick V Grishin
Journal:  Protein Sci       Date:  2017-02-13       Impact factor: 6.725

6.  Stability of proICA512/IA-2 and its targeting to insulin secretory granules require β4-sheet-mediated dimerization of its ectodomain in the endoplasmic reticulum.

Authors:  Juha M Torkko; M Evangelina Primo; Ronald Dirkx; Anne Friedrich; Antje Viehrig; Elisa Vergari; Barbara Borgonovo; Anke Sönmez; Carolin Wegbrod; Martina Lachnit; Carla Münster; Mauricio P Sica; Mario R Ermácora; Michele Solimena
Journal:  Mol Cell Biol       Date:  2015-01-05       Impact factor: 4.272

Review 7.  Structural and dynamical features of inteins and implications on protein splicing.

Authors:  Ertan Eryilmaz; Neel H Shah; Tom W Muir; David Cowburn
Journal:  J Biol Chem       Date:  2014-04-02       Impact factor: 5.157

8.  A binding domain on mesothelin for CA125/MUC16.

Authors:  Osamu Kaneko; Lucy Gong; Jingli Zhang; Johanna K Hansen; Raffit Hassan; Byungkook Lee; Mitchell Ho
Journal:  J Biol Chem       Date:  2008-12-15       Impact factor: 5.157

9.  Agrin binds BMP2, BMP4 and TGFbeta1.

Authors:  László Bányai; Peter Sonderegger; László Patthy
Journal:  PLoS One       Date:  2010-05-21       Impact factor: 3.240

Review 10.  Mucins in cancer: function, prognosis and therapy.

Authors:  Donald W Kufe
Journal:  Nat Rev Cancer       Date:  2009-12       Impact factor: 60.716

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