Literature DB >> 7664740

In vitro reconstitution of mammalian U2 and U5 snRNPs active in splicing: Sm proteins are functionally interchangeable and are essential for the formation of functional U2 and U5 snRNPs.

V Ségault1, C L Will, B S Sproat, R Lührmann.   

Abstract

An in vitro reconstitution/splicing complementation system has been developed which has allowed the investigation of the role of mammalian U2 and U5 snRNP components in splicing. U2 or U5 snRNP cores are first reconstituted from purified native snRNP core proteins and snRNA in the absence of cellular extract and are subsequently added to splicing extracts depleted of either U2 or U5 snRNP. When snRNPs reconstituted with HeLa U2 or U5 snRNA were added to U2- or U5-depleted nuclear extract, splicing was complemented. Addition of naked snRNA, on the other hand, did not restore splicing, demonstrating that the core proteins are essential for both U2 and U5 snRNP functions in splicing. Hybrid U2 or U5 snRNPs, reconstituted with core proteins isolated from U1 or U2 snRNPs, were equally active in splicing complementation, indicating that the snRNP core proteins are functionally interchangeable. U5 snRNPs reconstituted from in vitro transcribed U5 snRNA restored splicing to a level identical to that observed with particles reconstituted from authentic HeLa U5 snRNA. In contrast, splicing could not be restored to U2-depleted extract by the addition of snRNPs reconstituted from synthetic U2 snRNA, suggesting that U2 snRNA base modifications are essential for U2 snRNP function.

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Year:  1995        PMID: 7664740      PMCID: PMC394479          DOI: 10.1002/j.1460-2075.1995.tb00072.x

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  66 in total

1.  Phylogenetic conservation of modified nucleotides in the terminal loop 1 of the spliceosomal U5 snRNA.

Authors:  A Szkukalek; E Myslinski; A Mougin; R Luhrmann; C Branlant
Journal:  Biochimie       Date:  1995       Impact factor: 4.079

2.  Interaction of mammalian splicing factor SF3a with U2 snRNP and relation of its 60-kD subunit to yeast PRP9.

Authors:  R Brosi; K Gröning; S E Behrens; R Lührmann; A Krämer
Journal:  Science       Date:  1993-10-01       Impact factor: 47.728

Review 3.  Protein composition of mammalian spliceosomal snRNPs.

Authors:  C L Will; S E Behrens; R Lührmann
Journal:  Mol Biol Rep       Date:  1993-08       Impact factor: 2.316

4.  Evidence that the 60-kDa protein of 17S U2 small nuclear ribonucleoprotein is immunologically and functionally related to the yeast PRP9 splicing factor and is required for the efficient formation of prespliceosomes.

Authors:  S E Behrens; F Galisson; P Legrain; R Lührmann
Journal:  Proc Natl Acad Sci U S A       Date:  1993-09-01       Impact factor: 11.205

5.  Conformational changes of U6 RNA during the spliceosome cycle: an intramolecular helix is essential both for initiating the U4-U6 interaction and for the first step of slicing.

Authors:  T Wolff; A Bindereif
Journal:  Genes Dev       Date:  1993-07       Impact factor: 11.361

6.  Human snRNP polypeptide D1 promotes pre-mRNA splicing in yeast and defines nonessential yeast Smd1p sequences.

Authors:  B C Rymond; L A Rokeach; S O Hoch
Journal:  Nucleic Acids Res       Date:  1993-07-25       Impact factor: 16.971

7.  Sm and Sm-like proteins belong to a large family: identification of proteins of the U6 as well as the U1, U2, U4 and U5 snRNPs.

Authors:  B Séraphin
Journal:  EMBO J       Date:  1995-05-01       Impact factor: 11.598

8.  Nucleo-cytoplasmic transport of U snRNPs: definition of a nuclear location signal in the Sm core domain that binds a transport receptor independently of the m3G cap.

Authors:  U Fischer; V Sumpter; M Sekine; T Satoh; R Lührmann
Journal:  EMBO J       Date:  1993-02       Impact factor: 11.598

9.  The determinants for Sm protein binding to Xenopus U1 and U5 snRNAs are complex and non-identical.

Authors:  A Jarmolowski; I W Mattaj
Journal:  EMBO J       Date:  1993-01       Impact factor: 11.598

10.  Interaction of the human autoantigen p150 with splicing snRNPs.

Authors:  B J Blencowe; M Carmo-Fonseca; S E Behrens; R Lührmann; A I Lamond
Journal:  J Cell Sci       Date:  1993-07       Impact factor: 5.285

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  49 in total

1.  A limited number of pseudouridine residues in the human atac spliceosomal UsnRNAs as compared to human major spliceosomal UsnRNAs.

Authors:  S Massenet; C Branlant
Journal:  RNA       Date:  1999-11       Impact factor: 4.942

2.  Spliceosomal U snRNP core assembly: Sm proteins assemble onto an Sm site RNA nonanucleotide in a specific and thermodynamically stable manner.

Authors:  V A Raker; K Hartmuth; B Kastner; R Lührmann
Journal:  Mol Cell Biol       Date:  1999-10       Impact factor: 4.272

3.  Conserved loop I of U5 small nuclear RNA is dispensable for both catalytic steps of pre-mRNA splicing in HeLa nuclear extracts.

Authors:  V Ségault; C L Will; M Polycarpou-Schwarz; I W Mattaj; C Branlant; R Lührmann
Journal:  Mol Cell Biol       Date:  1999-04       Impact factor: 4.272

4.  Symmetrical dimethylation of arginine residues in spliceosomal Sm protein B/B' and the Sm-like protein LSm4, and their interaction with the SMN protein.

Authors:  H Brahms; L Meheus; V de Brabandere; U Fischer; R Lührmann
Journal:  RNA       Date:  2001-11       Impact factor: 4.942

5.  Proximity of the invariant loop of U5 snRNA to the second intron residue during pre-mRNA splicing.

Authors:  T S McConnell; J A Steitz
Journal:  EMBO J       Date:  2001-07-02       Impact factor: 11.598

Review 6.  Unconventional rules of small nuclear RNA transcription and cap modification in trypanosomatids.

Authors:  Christian Tschudi; Elisabetta Ullut
Journal:  Gene Expr       Date:  2002

7.  SMNrp is an essential pre-mRNA splicing factor required for the formation of the mature spliceosome.

Authors:  G Meister; S Hannus; O Plöttner; T Baars; E Hartmann; S Fakan; B Laggerbauer; U Fischer
Journal:  EMBO J       Date:  2001-05-01       Impact factor: 11.598

8.  Cajal body-specific small nuclear RNAs: a novel class of 2'-O-methylation and pseudouridylation guide RNAs.

Authors:  Xavier Darzacq; Beáta E Jády; Céline Verheggen; Arnold M Kiss; Edouard Bertrand; Tamás Kiss
Journal:  EMBO J       Date:  2002-06-03       Impact factor: 11.598

9.  In vitro reconstitution of yeast splicing with U4 snRNA reveals multiple roles for the 3' stem-loop.

Authors:  Amy J Hayduk; Martha R Stark; Stephen D Rader
Journal:  RNA       Date:  2012-03-12       Impact factor: 4.942

Review 10.  Functions and mechanisms of spliceosomal small nuclear RNA pseudouridylation.

Authors:  Guowei Wu; Andrew T Yu; Athena Kantartzis; Yi-Tao Yu
Journal:  Wiley Interdiscip Rev RNA       Date:  2011-02-18       Impact factor: 9.957

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