Literature DB >> 7663114

Structure and mechanism of DNA topoisomerases.

D B Wigley1.   

Abstract

DNA topoisomerases are ubiquitous enzymes that control the level of supercoiling of DNA in cells. There are several classes, each with distinct properties, which are briefly discussed in this review. High-resolution X-ray crystallographic structures have been obtained for fragments of two classes of these enzymes, which when combined with biochemical data, reveal a great deal about the gymnastics that the enzymes undergo during catalysis and provide fascinating snapshots of their mechanisms. These mechanisms are discussed in detail. Finally, the first structure of a topoisomerase in a complex with an antibiotic was recently solved. This structure is briefly discussed with regard to the biochemical activity of the compound.

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Year:  1995        PMID: 7663114     DOI: 10.1146/annurev.bb.24.060195.001153

Source DB:  PubMed          Journal:  Annu Rev Biophys Biomol Struct        ISSN: 1056-8700


  15 in total

1.  An antitumor drug-induced topoisomerase cleavage complex blocks a bacteriophage T4 replication fork in vivo.

Authors:  G Hong; K N Kreuzer
Journal:  Mol Cell Biol       Date:  2000-01       Impact factor: 4.272

2.  Prediction of mechanisms of action of antibacterial compounds by gene expression profiling.

Authors:  Bernd Hutter; Christoph Schaab; Sebastian Albrecht; Matthias Borgmann; Nina A Brunner; Christoph Freiberg; Karl Ziegelbauer; Charles O Rock; Igor Ivanov; Hannes Loferer
Journal:  Antimicrob Agents Chemother       Date:  2004-08       Impact factor: 5.191

3.  A computational framework for mechanical response of macromolecules: application to the salt concentration dependence of DNA bendability.

Authors:  Liang Ma; Arun Yethiraj; Xi Chen; Qiang Cui
Journal:  Biophys J       Date:  2009-05-06       Impact factor: 4.033

Review 4.  Overview of protein structural and functional folds.

Authors:  Peter D Sun; Christine E Foster; Jeffrey C Boyington
Journal:  Curr Protoc Protein Sci       Date:  2004-05

5.  Glycosylated flavones as selective inhibitors of topoisomerase IV.

Authors:  F X Bernard; S Sablé; B Cameron; J Provost; J F Desnottes; J Crouzet; F Blanche
Journal:  Antimicrob Agents Chemother       Date:  1997-05       Impact factor: 5.191

6.  Analysis of the mechanism of the Serratia nuclease using site-directed mutagenesis.

Authors:  P Friedhoff; B Kolmes; O Gimadutdinow; W Wende; K L Krause; A Pingoud
Journal:  Nucleic Acids Res       Date:  1996-07-15       Impact factor: 16.971

7.  Topoisomerase III acts upstream of Rad53p in the S-phase DNA damage checkpoint.

Authors:  R K Chakraverty; J M Kearsey; T J Oakley; M Grenon; M A de La Torre Ruiz; N F Lowndes; I D Hickson
Journal:  Mol Cell Biol       Date:  2001-11       Impact factor: 4.272

8.  Energy transfer to a proton-transfer fluorescence probe: tryptophan to a flavonol in human serum albumin.

Authors:  A Sytnik; I Litvinyuk
Journal:  Proc Natl Acad Sci U S A       Date:  1996-11-12       Impact factor: 11.205

9.  A role for topoisomerase III in Escherichia coli chromosome segregation.

Authors:  Brenda A Perez-Cheeks; Chong Lee; Ryo Hayama; Kenneth J Marians
Journal:  Mol Microbiol       Date:  2012-10-16       Impact factor: 3.501

10.  TROSY in triple-resonance experiments: new perspectives for sequential NMR assignment of large proteins.

Authors:  M Salzmann; K Pervushin; G Wider; H Senn; K Wüthrich
Journal:  Proc Natl Acad Sci U S A       Date:  1998-11-10       Impact factor: 11.205

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