Literature DB >> 7650181

Arbitrarily primed PCR DNA fingerprinting of Escherichia coli O157:H7 strains by using templates from boiled cultures.

G Madico1, N S Akopyants, D E Berg.   

Abstract

Arbitrarily primed PCR allows genetically different bacterial strains to be distinguished with great sensitivity and efficiency. We report that informative, reproducible arbitrarily primed PCR profiles can be obtained from Escherichia coli O157:H7 strains by using boiled stationary-phase cultures, without the need for time-consuming phenol extraction. This simple template preparation procedure should be especially useful in large epidemiologic studies when many strains must be typed.

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Year:  1995        PMID： 7650181      PMCID： PMC228210          DOI： 10.1128/jcm.33.6.1534-1536.1995

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN： 0095-1137            Impact factor:   5.948


  15 in total

Review 1.  The epidemiology of infections caused by Escherichia coli O157:H7, other enterohemorrhagic E. coli, and the associated hemolytic uremic syndrome.

Authors:  P M Griffin; R V Tauxe
Journal:  Epidemiol Rev       Date:  1991       Impact factor: 6.222

2.  DNA polymorphisms amplified by arbitrary primers are useful as genetic markers.

Authors:  J G Williams; A R Kubelik; K J Livak; J A Rafalski; S V Tingey
Journal:  Nucleic Acids Res       Date:  1990-11-25       Impact factor: 16.971

3.  The emergence of Escherichia coli O157:H7 infection in the United States. The changing epidemiology of foodborne disease.

Authors:  K L MacDonald; M T Osterholm
Journal:  JAMA       Date:  1993-05-05       Impact factor: 56.272

4.  RAPD (arbitrary primer) PCR is more sensitive than multilocus enzyme electrophoresis for distinguishing related bacterial strains.

Authors:  G Wang; T S Whittam; C M Berg; D E Berg
Journal:  Nucleic Acids Res       Date:  1993-12-25       Impact factor: 16.971

5.  Genetic analysis using random amplified polymorphic DNA markers.

Authors:  J G Williams; M K Hanafey; J A Rafalski; S V Tingey
Journal:  Methods Enzymol       Date:  1993       Impact factor: 1.600

6.  Clonal relationships among Escherichia coli strains that cause hemorrhagic colitis and infantile diarrhea.

Authors:  T S Whittam; M L Wolfe; I K Wachsmuth; F Orskov; I Orskov; R A Wilson
Journal:  Infect Immun       Date:  1993-05       Impact factor: 3.441

7.  DNA diversity among clinical isolates of Helicobacter pylori detected by PCR-based RAPD fingerprinting.

Authors:  N Akopyanz; N O Bukanov; T U Westblom; S Kresovich; D E Berg
Journal:  Nucleic Acids Res       Date:  1992-10-11       Impact factor: 16.971

Review 8.  Magnetic separation techniques in diagnostic microbiology.

Authors:  O Olsvik; T Popovic; E Skjerve; K S Cudjoe; E Hornes; J Ugelstad; M Uhlén
Journal:  Clin Microbiol Rev       Date:  1994-01       Impact factor: 26.132

9.  Laboratory investigation of a multistate food-borne outbreak of Escherichia coli O157:H7 by using pulsed-field gel electrophoresis and phage typing.

Authors:  T J Barrett; H Lior; J H Green; R Khakhria; J G Wells; B P Bell; K D Greene; J Lewis; P M Griffin
Journal:  J Clin Microbiol       Date:  1994-12       Impact factor: 5.948

10.  Molecular epidemiology of Escherichia coli O157:H7 strains by bacteriophage lambda restriction fragment length polymorphism analysis: application to a multistate foodborne outbreak and a day-care center cluster.

Authors:  M Samadpour; L M Grimm; B Desai; D Alfi; J E Ongerth; P I Tarr
Journal:  J Clin Microbiol       Date:  1993-12       Impact factor: 5.948
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  21 in total

1.  Improved repetitive-element PCR fingerprinting of Salmonella enterica with the use of extremely elevated annealing temperatures.

Authors:  J R Johnson; C Clabots
Journal:  Clin Diagn Lab Immunol       Date:  2000-03

2.  Characterization of a recurrent clonal type of Escherichia coli O157:H7 causing major outbreaks of infection in Scotland.

Authors:  L J Allison; P E Carter; F M Thomson-Carter
Journal:  J Clin Microbiol       Date:  2000-04       Impact factor: 5.948

3.  Comparison of ribotyping and randomly amplified polymorphic DNA PCR for characterization of Vibrio vulnificus.

Authors:  L Høi; A Dalsgaard; J L Larsen; J M Warner; J D Oliver
Journal:  Appl Environ Microbiol       Date:  1997-05       Impact factor: 4.792

4.  Effect of trimethoprim-sulfamethoxazole on recurrent bacteriuria and bacterial persistence in mice infected with uropathogenic Escherichia coli.

Authors:  Joel D Schilling; Robin G Lorenz; Scott J Hultgren
Journal:  Infect Immun       Date:  2002-12       Impact factor: 3.441

5.  Extended-spectrum β-lactamase-producing Escherichia coli strains in the feces of carriers contribute substantially to urinary tract infections in these patients.

Authors:  M Niki; I Hirai; A Yoshinaga; L Ulzii-Orshikh; A Nakata; A Yamamoto; M Yamamoto; Y Yamamoto
Journal:  Infection       Date:  2011-08-09       Impact factor: 3.553

6.  The corrosion process caused by the activity of the anaerobic sporulated bacterium Clostridium celerecrescens on API XL 52 steel.

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Journal:  Environ Sci Pollut Res Int       Date:  2019-08-14       Impact factor: 4.223

7.  Zoonotic potential of Escherichia coli isolates from retail chicken meat products and eggs.

Authors:  Natalie M Mitchell; James R Johnson; Brian Johnston; Roy Curtiss; Melha Mellata
Journal:  Appl Environ Microbiol       Date:  2014-12-05       Impact factor: 4.792

8.  Origin of contamination and genetic diversity of Escherichia coli in beef cattle.

Authors:  Mueen Aslam; Frances Nattress; Gordon Greer; Chris Yost; Colin Gill; Lynn McMullen
Journal:  Appl Environ Microbiol       Date:  2003-05       Impact factor: 4.792

9.  Human but not ovine isolates of Bordetella parapertussis are highly clonal as determined by PCR-based RAPD fingerprinting.

Authors:  M H Yuk; U Heininger; G Martínez de Tejada; J F Miller
Journal:  Infection       Date:  1998 Sep-Oct       Impact factor: 3.553

10.  Molecular epidemiology of fluoroquinolone-resistant Escherichia coli bloodstream isolates from patients admitted to European cancer centers.

Authors:  M Oethinger; S Conrad; K Kaifel; A Cometta; J Bille; G Klotz; M P Glauser; R Marre; W V Kern
Journal:  Antimicrob Agents Chemother       Date:  1996-02       Impact factor: 5.191
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