Literature DB >> 7638618

Protein reaction kinetics in a room-temperature glass.

S J Hagen1, J Hofrichter, W A Eaton.   

Abstract

Protein reaction kinetics in aqueous solution at room temperature are often simplified by the thermal averaging of conformational substates. These substates exhibit widely varying reaction rates that are usually exposed by trapping in a glass at low temperature. Here, it is shown that the solvent viscosity, rather than the low temperature, is primarily responsible for the trapping. This was demonstrated by placement of myoglobin in a glass at room temperature and subsequent observation of inhomogeneous reaction kinetics. The high solvent viscosity slowed the rate of crossing the energy barriers that separated the substates and also suppressed any change in the average protein conformation after ligand dissociation.

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Year:  1995        PMID: 7638618     DOI: 10.1126/science.7638618

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  43 in total

1.  Non-Arrhenius kinetics for the loop closure of a DNA hairpin.

Authors:  M I Wallace; L Ying; S Balasubramanian; D Klenerman
Journal:  Proc Natl Acad Sci U S A       Date:  2001-04-24       Impact factor: 11.205

2.  Electron transfer kinetics in photosynthetic reaction centers embedded in trehalose glasses: trapping of conformational substates at room temperature.

Authors:  Gerardo Palazzo; Antonia Mallardi; Alejandro Hochkoeppler; Lorenzo Cordone; Giovanni Venturoli
Journal:  Biophys J       Date:  2002-02       Impact factor: 4.033

3.  Enzymatic conformational fluctuations along the reaction coordinate of cytidine deaminase.

Authors:  Ryan C Noonan; Charles W Carter CW; Carey K Bagdassarian
Journal:  Protein Sci       Date:  2002-06       Impact factor: 6.725

4.  Adhesive-cohesive model for protein compressibility: an alternative perspective on stability.

Authors:  Voichita M Dadarlat; Carol Beth Post
Journal:  Proc Natl Acad Sci U S A       Date:  2003-11-24       Impact factor: 11.205

5.  Residual water modulates QA- -to-QB electron transfer in bacterial reaction centers embedded in trehalose amorphous matrices.

Authors:  Francesco Francia; Gerardo Palazzo; Antonia Mallardi; Lorenzo Cordone; Giovanni Venturoli
Journal:  Biophys J       Date:  2003-10       Impact factor: 4.033

6.  Fast dynamics and stabilization of proteins: binary glasses of trehalose and glycerol.

Authors:  Marcus T Cicerone; Christopher L Soles
Journal:  Biophys J       Date:  2004-06       Impact factor: 4.033

Review 7.  Structure, dynamics and reactions of protein hydration water.

Authors:  Jeremy C Smith; Franci Merzel; Ana-Nicoleta Bondar; Alexander Tournier; Stefan Fischer
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2004-08-29       Impact factor: 6.237

8.  New insights into allosteric mechanisms from trapping unstable protein conformations in silica gels.

Authors:  Cristiano Viappiani; Stefano Bettati; Stefano Bruno; Luca Ronda; Stefania Abbruzzetti; Andrea Mozzarelli; William A Eaton
Journal:  Proc Natl Acad Sci U S A       Date:  2004-09-22       Impact factor: 11.205

9.  The use of disaccharides in inhibiting enzymatic activity loss and secondary structure changes in freeze-dried β-galactosidase during storage.

Authors:  Ville Petteri Heljo; Kirsi Jouppila; Timo Hatanpää; Anne M Juppo
Journal:  Pharm Res       Date:  2010-10-22       Impact factor: 4.200

10.  Conditioning action of the environment on the protein dynamics studied through elastic neutron scattering.

Authors:  A Paciaroni; E Cornicchi; A De Francesco; M Marconi; G Onori
Journal:  Eur Biophys J       Date:  2006-06-08       Impact factor: 1.733

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