Literature DB >> 7635461

An efficient screening procedure detecting six novel mutations in the LDL receptor gene in Swedish children with hypercholesterolemia.

U Ekström1, M Abrahamson, T Sveger, P Lombardi, P Nilsson-Ehle.   

Abstract

Familial hypercholesterolemia (FH) is an autosomal semi-dominant disorder caused by defects in the low density lipoprotein receptor (LDLR) gene and is a well-documented risk factor for developing cardiovascular disease. The LDLR genes of five Swedish children with FH were examined in this study. Initial mutation screening was performed by denaturing gradient gel electrophoresis (DGGE) with enzymatically amplified exon-sized fragments, each containing a tailing GC-rich requence. The GC-clamped fragments had been synthesized with a restriction site adjacent to the intron-corresponding sequence to allow detachment of the clamps, thereby rendering the fragments suitable for subsequent analysis by single-strand conformation polymorphism (SSCP) analysis of samples from patients with no DGGE-detectable mutations. In addition, all the LDLR genes of the patients were screened for large alterations by restriction fragment length polymorphism analysis. Following this strategy, seven different, potentially disease-causing mutations were detected in the five children with FH. Six of the alterations, five single-base substitutions and one dinucleotide deletion, have not previously been described. DGGE detected six of the mutations and SSCP the seventh.

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Year:  1995        PMID: 7635461     DOI: 10.1007/bf00207370

Source DB:  PubMed          Journal:  Hum Genet        ISSN: 0340-6717            Impact factor:   4.132


  23 in total

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Authors:  K Hayashi
Journal:  Genet Anal Tech Appl       Date:  1992-06

Review 2.  The LDL receptor locus in familial hypercholesterolemia: mutational analysis of a membrane protein.

Authors:  H H Hobbs; D W Russell; M S Brown; J L Goldstein
Journal:  Annu Rev Genet       Date:  1990       Impact factor: 16.830

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Authors:  M Orita; Y Suzuki; T Sekiya; K Hayashi
Journal:  Genomics       Date:  1989-11       Impact factor: 5.736

4.  Detection of a frequent polymorphism in exon 10 of the low-density lipoprotein receptor gene.

Authors:  L Warnich; M J Kotze; E Langenhoven; A E Retief
Journal:  Hum Genet       Date:  1992-05       Impact factor: 4.132

5.  Apolipoprotein A-I:B ratio and B screening: a preliminary study of 10- and 11-year-old children.

Authors:  T Sveger; G Fex; C E Flodmark; T Kjellström; N Borgfors
Journal:  J Pediatr Gastroenterol Nutr       Date:  1990-02       Impact factor: 2.839

6.  A simple salting out procedure for extracting DNA from human nucleated cells.

Authors:  S A Miller; D D Dykes; H F Polesky
Journal:  Nucleic Acids Res       Date:  1988-02-11       Impact factor: 16.971

7.  Estimation of the concentration of low-density lipoprotein cholesterol in plasma, without use of the preparative ultracentrifuge.

Authors:  W T Friedewald; R I Levy; D S Fredrickson
Journal:  Clin Chem       Date:  1972-06       Impact factor: 8.327

8.  The low density lipoprotein receptor in Xenopus laevis. I. Five domains that resemble the human receptor.

Authors:  K D Mehta; W J Chen; J L Goldstein; M S Brown
Journal:  J Biol Chem       Date:  1991-06-05       Impact factor: 5.157

9.  Familial defective apolipoprotein B-100: low density lipoproteins with abnormal receptor binding.

Authors:  T L Innerarity; K H Weisgraber; K S Arnold; R W Mahley; R M Krauss; G L Vega; S M Grundy
Journal:  Proc Natl Acad Sci U S A       Date:  1987-10       Impact factor: 11.205

Review 10.  Molecular genetics of the LDL receptor gene in familial hypercholesterolemia.

Authors:  H H Hobbs; M S Brown; J L Goldstein
Journal:  Hum Mutat       Date:  1992       Impact factor: 4.878

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  9 in total

1.  Software and database for the analysis of mutations in the human LDL receptor gene.

Authors:  M Varret; J P Rabès; G Collod-Béroud; C Junien; C Boileau; C Béroud
Journal:  Nucleic Acids Res       Date:  1997-01-01       Impact factor: 16.971

2.  Mutations in the low-density-lipoprotein receptor gene in German patients with familial hypercholesterolaemia.

Authors:  N Weiss; G Binder; C Keller
Journal:  J Inherit Metab Dis       Date:  2000-12       Impact factor: 4.982

3.  Expression of an LDL receptor allele with two different mutations (E256K and I402T).

Authors:  U Ekström; M Abrahamson; T Sveger; X M Sun; A K Soutar; P Nilsson-Ehle
Journal:  Mol Pathol       Date:  2000-02

4.  Sequence diversity in genes of lipid metabolism.

Authors:  C K Garcia; G Mues; Y Liao; T Hyatt; N Patil; J C Cohen; H H Hobbs
Journal:  Genome Res       Date:  2001-06       Impact factor: 9.043

5.  LDLR Database (second edition): new additions to the database and the software, and results of the first molecular analysis.

Authors:  M Varret; J P Rabés; R Thiart; M J Kotze; H Baron; A Cenarro; O Descamps; M Ebhardt; J C Hondelijn; G M Kostner; Y Miyake; M Pocovi; H Schmidt; H Schuster; M Stuhrmann; T Yamamura; C Junien; C Béroud; C Boileau
Journal:  Nucleic Acids Res       Date:  1998-01-01       Impact factor: 16.971

6.  Common and rare single nucleotide polymorphisms in the LDLR gene are present in a black South African population and associate with low-density lipoprotein cholesterol levels.

Authors:  Tertia van Zyl; Johann C Jerling; Karin R Conradie; Edith J M Feskens
Journal:  J Hum Genet       Date:  2013-11-28       Impact factor: 3.172

7.  The importance of an integrated analysis of clinical, molecular, and functional data for the genetic diagnosis of familial hypercholesterolemia.

Authors:  Asier Benito-Vicente; Ana Catarina Alves; Aitor Etxebarria; Ana Medeiros Medeiros; Cesar Martin; Mafalda Bourbon
Journal:  Genet Med       Date:  2015-03-05       Impact factor: 8.822

8.  Genetic screening for homozygous and heterozygous familial hypercholesterolemia.

Authors:  Maria C Izar; Valéria A Machado; Francisco A Fonseca
Journal:  Appl Clin Genet       Date:  2010-12-08

9.  Use of targeted exome sequencing in genetic diagnosis of Chinese familial hypercholesterolemia.

Authors:  Wen-Feng Wu; Li-Yuan Sun; Xiao-Dong Pan; Shi-Wei Yang; Lv-Ya Wang
Journal:  PLoS One       Date:  2014-04-10       Impact factor: 3.240

  9 in total

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