Literature DB >> 7599954

13C NMR relaxation studies of molecular motion in peptide fragments from human transthyretin.

J A Jarvis1, D J Craik.   

Abstract

Natural-abundance 13C T1 and NOE measurements have been made for backbone and side-chain sites in peptide fragments of transthyretin (TTR 10-20, TTR 105-115, and TTR 105-115Met111) at 13C Larmor frequencies of 125 and 75 MHz. These peptides have previously been implicated in the formation of amyloid fibrils. The data were systematically assessed for their consistency with theoretical relaxation parameters derived from models of molecular motion. It was shown that of four models, ranging from simple isotropic motion to one defining internal wobbling of the 13C-1H vector, the "model-free approach" (Lipari and Szabo, J. Am. Chem. Soc. 104, 4546, 1982) was best able to predict the experimental data. These peptides exhibited overall correlation times close to 1 ns. Internal motions with effective correlation times of approximately 0.08 ns were observed for backbone carbon sites, and side-chain carbons exhibited more rapid and less ordered motions. No indication of retarded motion due to the presence of small peptide aggregates was detected, in agreement with reports of the rapid incorporation of these species into amyloid fibrils.

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Year:  1995        PMID: 7599954     DOI: 10.1006/jmrb.1995.1065

Source DB:  PubMed          Journal:  J Magn Reson B        ISSN: 1064-1866


  6 in total

1.  Backbone and side-chain dynamics of residues in a partially folded beta-sheet peptide from platelet factor-4.

Authors:  V A Daragan; E E Ilyina; C G Fields; G B Fields; K H Mayo
Journal:  Protein Sci       Date:  1997-02       Impact factor: 6.725

2.  Internal mobility of cyclic RGD hexapeptides studied by 13C NMR relaxation and the model-free approach.

Authors:  J Briand; K D Kopple
Journal:  J Biomol NMR       Date:  1995-12       Impact factor: 2.835

3.  Backbone dynamics of a bacterially expressed peptide from the receptor binding domain of Pseudomonas aeruginosa pilin strain PAK from heteronuclear 1H-15N NMR spectroscopy.

Authors:  A P Campbell; L Spyracopoulos; R T Irvin; B D Sykes
Journal:  J Biomol NMR       Date:  2000-07       Impact factor: 2.835

4.  Insights into the molecular flexibility of θ-defensins by NMR relaxation analysis.

Authors:  Anne C Conibear; Conan K Wang; Tao Bi; K Johan Rosengren; Julio A Camarero; David J Craik
Journal:  J Phys Chem B       Date:  2014-11-25       Impact factor: 2.991

5.  Molecular motions of a glycopeptide from human serum transferrin studied by 13C nuclear magnetic resonance.

Authors:  J Lu; H Van Halbeek
Journal:  Biophys J       Date:  1997-01       Impact factor: 4.033

6.  Backbone dynamics of an alamethicin in methanol and aqueous detergent solution determined by heteronuclear (1)H- (15)N NMR spectroscopy.

Authors:  L Spyracopoulos; A A Yee; J D O'Neil
Journal:  J Biomol NMR       Date:  1996-06       Impact factor: 2.835

  6 in total

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