Literature DB >> 7590296

Complete sequences and organization of the rrnA operon from campylobacter jejuni TGH9011 (ATCC43431).

N W Kim1, R R Gutell, V L Chan.   

Abstract

The rrnA ribosomal RNA (rRNA) operon of Campylobacter jejuni (Cj) TGH9011 (ATCC43431) was cloned and sequenced to completion. rRNAs were then characterized by primer extension and S1 nuclease mapping analysis. The secondary structure models of Cj 16S and 23S rRNAs were constructed, and the models were compared to the corresponding models from other eubacterial rRNA. The analysis presented a typical 5'-promoter-16S-tRNAs-23S-5S-terminator-3' prokaryotic rRNA operon structure. However, an unusual organization of the intercistronic tRNAs was observed where the two tRNAs, tRNA(Ala) and tRNA(Ile), were present in the order 5'-16S-tRNA(Ala)-tRNA(Ile)-23S-3', which is opposite of the typical 5'-16S-tRNA(Ile)-tRNA(Ala)-23S-3' structure observed in other bacteria.

Entities:  

Mesh：

Substances：

Year:  1995        PMID： 7590296     DOI： 10.1016/0378-1119(95)00471-h

Source DB:  PubMed          Journal:  Gene        ISSN： 0378-1119            Impact factor:   3.688


  7 in total

1.  The internal transcribed spacer region, a new tool for use in species differentiation and delineation of systematic relationships within the Campylobacter genus.

Authors:  Si Ming Man; Nadeem O Kaakoush; Sophie Octavia; Hazel Mitchell
Journal:  Appl Environ Microbiol       Date:  2010-03-26       Impact factor: 4.792

2.  Molecular analysis of the 16S-23S rDNA internal spacer region (ISR) and truncated tRNA(Ala) gene segments in Campylobacter lari.

Authors:  K Hayashi; A Tazumi; S Nakanishi; T Nakajima; K Matsubara; H Ueno; J E Moore; B C Millar; M Matsuda
Journal:  World J Microbiol Biotechnol       Date:  2012-04-10       Impact factor: 3.312

3.  Molecular identification of Campylobacter concisus.

Authors:  M I Matsheka; A J Lastovica; B G Elisha
Journal:  J Clin Microbiol       Date:  2001-10       Impact factor: 5.948

4.  Identification of Campylobacter jejuni promoter sequences.

Authors:  M M Wösten; M Boeve; M G Koot; A C van Nuenen; B A van der Zeijst
Journal:  J Bacteriol       Date:  1998-02       Impact factor: 3.490

5.  Specific PCR identification and differentiation of the thermophilic campylobacters, Campylobacter jejuni, C. coli, C. lari, and C. upsaliensis.

Authors:  C Fermér; E O Engvall
Journal:  J Clin Microbiol       Date:  1999-10       Impact factor: 5.948

6.  Species-specific identification of campylobacters by partial 16S rRNA gene sequencing.

Authors:  Gregor Gorkiewicz; Gebhard Feierl; Caroline Schober; Franz Dieber; Josef Köfer; Rudolf Zechner; Ellen L Zechner
Journal:  J Clin Microbiol       Date:  2003-06       Impact factor: 5.948

7.  Fragmentation of the large subunit ribosomal RNA gene in oyster mitochondrial genomes.

Authors:  Coren A Milbury; Jung C Lee; Jamie J Cannone; Patrick M Gaffney; Robin R Gutell
Journal:  BMC Genomics       Date:  2010-09-02       Impact factor: 3.969
  7 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.