Literature DB >> 7574652

Genotyping of rotaviruses isolated from sewage.

R Gajardo1, N Bouchriti, R M Pintó, A Bosch.   

Abstract

Rotaviruses from environmental samples have been genotyped by a seminested reverse transcription PCR assay with serotype-specific primers derived from variable regions of gene 9, which produce different characteristic segment sizes for serotypes 1 to 4. The method enabled the detection and identification of type 1, 2, and 3 group A rotaviruses in sewage.

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Year:  1995        PMID： 7574652      PMCID： PMC167622          DOI： 10.1128/aem.61.9.3460-3462.1995

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN： 0099-2240            Impact factor:   4.792


  12 in total

1.  Distribution of serotypes of human rotavirus in different populations.

Authors:  P A Woods; J Gentsch; V Gouvea; L Mata; M Santosham; Z S Bai; S Urasawa; R I Glass
Journal:  J Clin Microbiol       Date:  1992-04       Impact factor: 5.948

2.  Rapid and simple method for purification of nucleic acids.

Authors:  R Boom; C J Sol; M M Salimans; C L Jansen; P M Wertheim-van Dillen; J van der Noordaa
Journal:  J Clin Microbiol       Date:  1990-03       Impact factor: 5.948

3.  Detection of naturally occurring enteroviruses in waters by reverse transcription, polymerase chain reaction, and hybridization.

Authors:  H Kopecka; S Dubrou; J Prevot; J Marechal; J M López-Pila
Journal:  Appl Environ Microbiol       Date:  1993-04       Impact factor: 4.792

4.  Polymerase chain reaction amplification and typing of rotavirus nucleic acid from stool specimens.

Authors:  V Gouvea; R I Glass; P Woods; K Taniguchi; H F Clark; B Forrester; Z Y Fang
Journal:  J Clin Microbiol       Date:  1990-02       Impact factor: 5.948

5.  Non-seasonal distribution of rotavirus in Barcelona raw sewage.

Authors:  A Bosch; R M Pinto; J Jofre
Journal:  Zentralbl Bakteriol Mikrobiol Hyg B       Date:  1988-06

6.  A method to detect enteroviruses in sewage sludge-amended soil using the PCR.

Authors:  T M Straub; I L Pepper; M Abbaszadegan; C P Gerba
Journal:  Appl Environ Microbiol       Date:  1994-03       Impact factor: 4.792

7.  Detection of enteric viruses in oysters by using the polymerase chain reaction.

Authors:  R L Atmar; T G Metcalf; F H Neill; M K Estes
Journal:  Appl Environ Microbiol       Date:  1993-02       Impact factor: 4.792

8.  Development of a method for detection of human rotavirus in water and sewage.

Authors:  E M Smith; C P Gerba
Journal:  Appl Environ Microbiol       Date:  1982-06       Impact factor: 4.792

9.  Simple method of concentrating enteroviruses and hepatitis A virus from sewage and ocean water for rapid detection by reverse transcriptase-polymerase chain reaction.

Authors:  Y L Tsai; M D Sobsey; L R Sangermano; C J Palmer
Journal:  Appl Environ Microbiol       Date:  1993-10       Impact factor: 4.792

10.  Use of the colonic carcinoma cell line CaCo-2 for in vivo amplification and detection of enteric viruses.

Authors:  R M Pintó; J M Diez; A Bosch
Journal:  J Med Virol       Date:  1994-11       Impact factor: 2.327
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  9 in total

1.  Electropositive filter membrane as an alternative for the elimination of PCR inhibitors from sewage and water samples.

Authors:  A P Queiroz; F M Santos; A Sassaroli; C M Hársi; T A Monezi; D U Mehnert
Journal:  Appl Environ Microbiol       Date:  2001-10       Impact factor: 4.792

2.  Group A rotavirus in sewage samples from Barcelona and Cairo: emergence of unusual genotypes.

Authors:  Cristina Villena; Waled Morsy El-Senousy; F Xavier Abad; Rosa M Pintó; Albert Bosch
Journal:  Appl Environ Microbiol       Date:  2003-07       Impact factor: 4.792

3.  Flow cytometry detection of infectious rotaviruses in environmental and clinical samples.

Authors:  F X Abad; R M Pintó; A Bosch
Journal:  Appl Environ Microbiol       Date:  1998-07       Impact factor: 4.792

4.  Astrovirus survival in drinking water.

Authors:  F X Abad; R M Pintó; C Villena; R Gajardo; A Bosch
Journal:  Appl Environ Microbiol       Date:  1997-08       Impact factor: 4.792

5.  Molecular epidemiological survey of rotaviruses in sewage by reverse transcriptase seminested PCR and restriction fragment length polymorphism assay.

Authors:  E Dubois; F Le Guyader; L Haugarreau; H Kopecka; M Cormier; M Pommepuy
Journal:  Appl Environ Microbiol       Date:  1997-05       Impact factor: 4.792

6.  Molecular epidemiology of group A rotaviruses in water sources and selected raw vegetables in southern Africa.

Authors:  W B van Zyl; N A Page; W O K Grabow; A D Steele; M B Taylor
Journal:  Appl Environ Microbiol       Date:  2006-07       Impact factor: 4.792

7.  Detection of low levels of enteric viruses in metropolitan and airplane sewage.

Authors:  Y S Shieh; R S Baric; M D Sobsey
Journal:  Appl Environ Microbiol       Date:  1997-11       Impact factor: 4.792

8.  Global occurrence and emission of rotaviruses to surface waters.

Authors:  Nicholas M Kiulia; Nynke Hofstra; Lucie C Vermeulen; Maureen A Obara; Gertjan Medema; Joan B Rose
Journal:  Pathogens       Date:  2015-05-13

Review 9.  New tools for the study and direct surveillance of viral pathogens in water.

Authors:  Albert Bosch; Susana Guix; Daisuke Sano; Rosa M Pintó
Journal:  Curr Opin Biotechnol       Date:  2008-05-26       Impact factor: 9.740
  9 in total

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