Literature DB >> 7545936

The utility of SATA satellite DNA sequences for inferring phylogenetic relationships among the three major genera of tilapiine cichlid fishes.

J P Franck1, I Kornfield, J M Wright.   

Abstract

The SATA satellite DNA family of sequences, composed of three size variants of approximately 237, 230, and 209 bp, is conserved in the genomes of tilapiine and haplochromine cichlid fishes. In the present study we examined the utility of the SATA sequences for inferring phylogenetic relationships among the three major genera of tilapiine fishes, Oreochromis, Sarotherodon, and Tilapia. Hybridization of the monomer SATA repeat to genomic DNA of representative cichlid species established conservation of the sequence in the African tilapine and haplochromine lineages and its absence from other cichlid lineages. Bootstrapped DNA parsimony and neighbor-joining analyses of derived consensus sequences revealed two distinct clades, one containing the mouthbrooding genera Oreochromis and Sarotherodon, and the other containing the substrate spawning genus Tilapia. These results are consistent with recent independent studies using mitochondrial DNA and establish the utility of the SATA satellite DNA family for phylogenetic reconstruction. Concerted evolution of the SATA sequences was also demonstrated within the tilapiine tribe.

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Year:  1994        PMID: 7545936     DOI: 10.1006/mpev.1994.1002

Source DB:  PubMed          Journal:  Mol Phylogenet Evol        ISSN: 1055-7903            Impact factor:   4.286


  11 in total

1.  Nucleotide sequence of BamHI family satellite DNA and its unit length polymorphism in bluegill sunfish Lepomis macrochirus.

Authors:  T Takahashi; Y Kawamura; N Sakata; G E Elmesiry; Y Takemon; K Tanida; S Minoshima; N Shimizu; M Kato
Journal:  Mol Biol Rep       Date:  2001       Impact factor: 2.316

2.  Concerted evolution of satellite DNA in Sarcocapnos: a matter of time.

Authors:  Miguel A Pérez-Gutiérrez; Víctor N Suárez-Santiago; Inmaculada López-Flores; Ana Teresa Romero; Manuel A Garrido-Ramos
Journal:  Plant Mol Biol       Date:  2011-11-12       Impact factor: 4.076

3.  Linkage relationships and haplotype polymorphism among cichlid Mhc class II B loci.

Authors:  E Málaga-Trillo; Z Zaleska-Rutczynska; B McAndrew; V Vincek; F Figueroa; H Sültmann; J Klein
Journal:  Genetics       Date:  1998-07       Impact factor: 4.562

4.  Molecular cytogenetic analysis of heterochromatin in the chromosomes of tilapia, Oreochromis niloticus (Teleostei: Cichlidae).

Authors:  C Oliveira; J M Wright
Journal:  Chromosome Res       Date:  1998-04       Impact factor: 5.239

5.  Cytogenetics of the genus Leporinus (Pisces, Anostomidae). II. Molecular cytogenetics, organization and evolutionary conservation of a chromosome-specific satellite DNA from Leporinus obtusidens.

Authors:  M R Koehler; T Haaf; M Guttenbach; M Schartl; M Schmid
Journal:  Chromosome Res       Date:  1997-08       Impact factor: 5.239

6.  Complete mitochondrial DNA sequences of the Nile tilapia (Oreochromis niloticus) and Blue tilapia (Oreochromis aureus): genome characterization and phylogeny applications.

Authors:  Anyuan He; Yongju Luo; Hong Yang; Liping Liu; Sifa Li; Chenghui Wang
Journal:  Mol Biol Rep       Date:  2010-09-21       Impact factor: 2.316

7.  Chromosome evolution in African cichlid fish: contributions from the physical mapping of repeated DNAs.

Authors:  I A Ferreira; A B Poletto; T D Kocher; J C Mota-Velasco; D J Penman; C Martins
Journal:  Cytogenet Genome Res       Date:  2010-07-06       Impact factor: 1.636

8.  The B chromosomes of the African cichlid fish Haplochromis obliquidens harbour 18S rRNA gene copies.

Authors:  Andréia B Poletto; Irani A Ferreira; Cesar Martins
Journal:  BMC Genet       Date:  2010-01-05       Impact factor: 2.797

9.  Evaluation of intra- and interspecific divergence of satellite DNA sequences by nucleotide frequency calculation and pairwise sequence comparison.

Authors:  Mikio Kato
Journal:  Biol Proced Online       Date:  2003-03-04       Impact factor: 3.244

10.  Cytogenetic Characterization of Seven Novel satDNA Markers in Two Species of Spined Loaches (Cobitis) and Their Clonal Hybrids.

Authors:  Anatolie Marta; Dmitry Dedukh; Oldrich Bartos; Zuzana Majtanova; Karel Janko
Journal:  Genes (Basel)       Date:  2020-06-04       Impact factor: 4.096

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