Literature DB >> 7544164

Gramicidin tryptophans mediate formamidinium-induced channel stabilization.

S A Seoh1, D Busath.   

Abstract

Compared with alkali metal cations, formamidinium ions stabilize the gramicidin A channel molecule in monoolein bilayers (Seoh and Busath, 1993a). A similar effect is observed with N-acetyl gramicidin channel molecules in spite of the modified forces at the dimeric junction (Seoh and Busath, 1993b). Here we use electrophysiological measurements with tryptophan-to-phenylalanine-substituted gramicidin analogs to show that the formamidinium-induced channel molecule stabilization is eliminated when the four gramicidin tryptophans are replaced with phenylalanines in gramicidin M-. This suggests that the stabilization is mediated by the tryptophan side chains. Tryptophan residues 9, 13, and 15 must cooperate to produce the effect because replacement of any one of the three with phenylalanine significantly reduces stabilization; replacement of Trp-11 with phenylalanine causes negligible decrease in stabilization. In addition, formamidinium-related current-voltage supralinearity and open-channel noise are absent with gramicidin M-. When the lipid bilayer was formed with monoolein ether rather than monoolein ester, the channel lifetimes were reduced markedly and, at low voltage and relative to those in KCl solution, were decreased by a factor of 2, whereas the open-channel noise was unaffected and the current-voltage relation was only modestly affected. These results suggest that formamidinium modifies the state of the tryptophan side chains, which, in turn, affects channel lifetime, current-voltage supralinearity, and open-channel noise through interactions with water or lipid headgroup atoms including the lipid ester carbonyl.

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Year:  1995        PMID: 7544164      PMCID: PMC1282137          DOI: 10.1016/S0006-3495(95)80409-1

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  37 in total

1.  On the helix sense of gramicidin A single channels.

Authors:  R E Koeppe; L L Providence; D V Greathouse; F Heitz; Y Trudelle; N Purdie; O S Andersen
Journal:  Proteins       Date:  1992-01

2.  Deformation free energy of bilayer membrane and its effect on gramicidin channel lifetime.

Authors:  H W Huang
Journal:  Biophys J       Date:  1986-12       Impact factor: 4.033

3.  How can the aromatic side-chains modulate the conductance of the gramicidin channel? A new approach using non-coded amino acids.

Authors:  P Daumas; D Benamar; F Heitz; L Ranjalahy-Rasoloarijao; R Mouden; R Lazaro; A Pullman
Journal:  Int J Pept Protein Res       Date:  1991-09

4.  Single channels and surface potential of linear gramicidins.

Authors:  F Heitz; N Van Mau; R Bennes; P Daumas; Y Trudelle
Journal:  Biochimie       Date:  1989-01       Impact factor: 4.079

5.  Single channels of 9, 11, 13, 15-destryptophyl-phenylalanyl-gramicidin A.

Authors:  F Heitz; G Spach; Y Trudelle
Journal:  Biophys J       Date:  1982-10       Impact factor: 4.033

6.  Multioccupancy models for single filing ionic channels: theoretical behavior of a four-site channel with three barriers separating the sites.

Authors:  J Sandblom; G Eisenman; J Hägglund
Journal:  J Membr Biol       Date:  1983       Impact factor: 1.843

7.  Single-channel parameters of gramicidin A,B, and C.

Authors:  E Bamberg; K Noda; E Gross; P Läuger
Journal:  Biochim Biophys Acta       Date:  1976-01-21

8.  Effect of increased chain packing on gramicidin-lipid interactions.

Authors:  S F Scarlata
Journal:  Biochemistry       Date:  1991-10-15       Impact factor: 3.162

9.  Tryptophans in membrane proteins: indole ring orientations and functional implications in the gramicidin channel.

Authors:  W Hu; K C Lee; T A Cross
Journal:  Biochemistry       Date:  1993-07-13       Impact factor: 3.162

10.  The dependence of the conductance and lifetime of gramicidin channels on the thickness and tension of lipid bilayers.

Authors:  V S Rudnev; L N Ermishkin; L A Fonina
Journal:  Biochim Biophys Acta       Date:  1981-03-20
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  10 in total

1.  Membrane dipole potential modulates proton conductance through gramicidin channel: movement of negative ionic defects inside the channel.

Authors:  Tatyana I Rokitskaya; Elena A Kotova; Yuri N Antonenko
Journal:  Biophys J       Date:  2002-02       Impact factor: 4.033

2.  Effect of the dipole potential of a bilayer lipid membrane on gramicidin channel dissociation kinetics.

Authors:  T I Rokitskaya; Y N Antonenko; E A Kotova
Journal:  Biophys J       Date:  1997-08       Impact factor: 4.033

3.  Thallous ion movements through gramicidin channels incorporated in lipid monolayers supported by mercury.

Authors:  Lucia Becucci; Maria Rosa Moncelli; Rolando Guidelli
Journal:  Biophys J       Date:  2002-02       Impact factor: 4.033

4.  Heterodimer formation and crystal nucleation of gramicidin D.

Authors:  B M Burkhart; R M Gassman; D A Langs; W A Pangborn; W L Duax
Journal:  Biophys J       Date:  1998-11       Impact factor: 4.033

5.  Molecular dynamics study of free energy profiles for organic cations in gramicidin A channels.

Authors:  Y Hao; M R Pear; D D Busath
Journal:  Biophys J       Date:  1997-10       Impact factor: 4.033

6.  Noncontact dipole effects on channel permeation. III. Anomalous proton conductance effects in gramicidin.

Authors:  L R Phillips; C D Cole; R J Hendershot; M Cotten; T A Cross; D D Busath
Journal:  Biophys J       Date:  2008-11-21       Impact factor: 4.033

7.  Effect of gramicidin A on the dipole potential of phospholipid membranes.

Authors:  V L Shapovalov; E A Kotova; T I Rokitskaya; Y N Antonenko
Journal:  Biophys J       Date:  1999-07       Impact factor: 4.033

8.  Conducting gramicidin channel activity in phospholipid monolayers.

Authors:  A Nelson
Journal:  Biophys J       Date:  2001-06       Impact factor: 4.033

9.  Noncontact dipole effects on channel permeation. I. Experiments with (5F-indole)Trp13 gramicidin A channels.

Authors:  D D Busath; C D Thulin; R W Hendershot; L R Phillips; P Maughan; C D Cole; N C Bingham; S Morrison; L C Baird; R J Hendershot; M Cotten; T A Cross
Journal:  Biophys J       Date:  1998-12       Impact factor: 4.033

10.  The gramicidin channel ion permeation free-energy profile: direct and indirect effects of CHARMM force field improvements.

Authors:  Morad Mustafa; David D Busath
Journal:  Interdiscip Sci       Date:  2009-06       Impact factor: 2.233

  10 in total

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